Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01555 ATGGCCGTGGACCTCATGACGACCGGTTACACCCGAAACGACAACATCAGTAGTTTCACAACCAAAGCCGAGGAAAATGCCGTCCAAGAAGCCGCTTCTGGTCTAGAGAGCGTCGAGAAGCTCATCAGACTCCTCTCCCAAACCCAAGCCCAAGCCCAAGCCCACCATCAATTCAACAACAACAATAGCTCTAGTAATGAAATCGCCATCGCCATGGACTGCAAAGCCGTCGCTGACGTGGCAGTCTCCAAGTTCCAGAAGGTCATTTCCCTCCTCGGCCGAACCCGTACCGGCCACGCCAGGTTCCGACGCGCCCCTCTCCCCAACCAACACCAACACACCCAACCTCCCTCCGAACCGCCCGTTCTCCACGCTACCCCGCTGCACCAGATCCCACCTCCCTCCCTTCACCAAATCCCCAAAACCGAGAAACACCTCAACGATTCATCGTCTAAGACGCTTCATTTCTCATACCCCTCCGCCGTTACTTCCTTCGTCTCCTCCCTCACCGGCGACGCCGCCGACAACAAACAACCATCCCCGGCGGCCACGACCACGACCTCCCACTTTCAGATCACGAGCCTCTCTCACGTGTCGTCCGCGGGGAAGCCTCCGCTTTCGTCTTCCTCTTTCAAGAGAAAGTGCAGCTCTGAGAATTTAGGTTCTGGAAAGTGCGGTAGCTCCTCTAGCCGCTGTCATTGTTCCAAAAAGAGGAAAATGAGGTTGAAGAGGGTAGTGAGGGTACCAGCTATAAGCTTGAAGATGGCTGATATTCCACCAGATGATTATTCTTGGAGGAAATATGGACAGAAACCAATTAAAGGATCGCCTCATCCAAGGGGTTACTACAAGTGCAGTAGTGTGAGAGGGTGTCCAGCGCGAAAACATGTGGAAAGAGCTTTGGATGATCCAGCTATGCTGGTGGTAACATACGAGGGAGAGCACAATCACACTGTCTCTGCTGCCGATGCTACTAATCTCATTCTAGAATCGTCTTGA 999 0.5325 MAVDLMTTGYTRNDNISSFTTKAEENAVQEAASGLESVEKLIRLLSQTQAQAQAHHQFNNNNSSSNEIAIAMDCKAVADVAVSKFQKVISLLGRTRTGHARFRRAPLPNQHQHTQPPSEPPVLHATPLHQIPPPSLHQIPKTEKHLNDSSSKTLHFSYPSAVTSFVSSLTGDAADNKQPSPAATTTTSHFQITSLSHVSSAGKPPLSSSSFKRKCSSENLGSGKCGSSSSRCHCSKKRKMRLKRVVRVPAISLKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPAMLVVTYEGEHNHTVSAADATNLILESS 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01555 332 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 19 332 IPR044810 GO:0003700
Gma17g01555 332 SMART WRKY_cls 259 319 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma17g01555 332 MobiDBLite consensus disorder prediction 195 232 - -
Gma17g01555 332 Pfam Plant zinc cluster domain 212 257 IPR018872 -
Gma17g01555 332 Pfam WRKY DNA -binding domain 261 317 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma17g01555 332 SUPERFAMILY WRKY DNA-binding domain 256 319 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma17g01555 332 PANTHER WRKY TRANSCRIPTION FACTOR 7-RELATED 19 332 - -
Gma17g01555 332 MobiDBLite consensus disorder prediction 106 152 - -
Gma17g01555 332 Gene3D WRKY domain 245 320 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma17g01555 332 ProSiteProfiles WRKY domain profile. 254 320 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma17g01555 332 MobiDBLite consensus disorder prediction 195 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01555 Gma-Chr17 15889389 15890924 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01555 24 317 WRKY Transcription Factor Family AT2G24570 43.161 4.29e-72 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma17g01555 WRKY 4.7e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01555 - - gmx:100788748 603.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01555 17 15889389 15890924 Gma05g00951 05 27573150 27575137 GST
Gma17g01555 17 15889389 15890924 Gma01g01920 01 54730036 54732795 PCT
Gma17g01555 17 15889389 15890924 Gma11g00485 11 4054124 4055815 PCT