Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01551 ATGGAGGACAAGATAGAGACTGCAGACAAAAAGGTGCTGGTTGATATTGTAAAATTAGCACAAAAAAGAGGCTTAAAGGGTAATCTGGGAGGCTGGAAAGAATTCTTGAACAGTCATGATAAAAAGTTTGGGGCAGGTTTGAGTGATCCATCAAAGAGATCCCATGAGGTATTGGCTGCATTTCTAAAGACATTTTCAAAGGAGGAAGATTTAAAGTTTTTTGATAACATCATGCGACATCATTCAAATCAATATATGTTGGAGCGACTGAAAGATAAATCTCATGATTCCCCTGAGCAGAGGCTAGTCCAAGCAACTCTGCAGCATCCATTATATCCATTGGATTATTCATTTCCATCAATTGATGAGGGGTGGATAGTTGTAAACTTCAAAAACAAACCCAAGGTGATGAAGTCTACTGAAATGGTTGCTGTTGACTGCGAAATGGTTCTCTGTGAAGATGGGACTGAAGCAGTAGTTAAAGTCTGTGTGGTAGACCATAATTTAGAGGTCAAACTAGATAAACTTGTAAAACCAGACAAAGAAATTGCAGACTACAGAACAGAGATTACTGGTGTCTCTTCTCAAGATCTAGAGGCAGTGACTTGCTCCTTGGCTGATATACAGAAATACATGAAGAAGTTGTTATCAAGTGGAATCATATTAGTGGGACACAGTTTACATAATGATCTACGTGTGCTGAAGCTTGATCATGTTAGAGTGATTGACACTTCTTATATCTTCCAATCCTTGGATGGATCTATTCACAAGAGACCTTCTTTGAATAGCTTATGTCAGGCTGTGTTGCACCATGAAGTTAGGGAAAAGGGTGCTCCACATAATTGTCTAGATGATGCAAAAGCAGCTATGGACCTTGTTCTTGCGAAGATCAAACATGGAGTTGATAAGGAATTTCCAATTGCATTAGTTCAAGAGCATGTTCCAGAAAGTGAGCTGGCAAAGCTTCTTCTTCACAAGATACCAAACACTGTAAACATTGAAACGTTGCATAAAATTCTTCCTGGCAATTTCAAAATTGAACTGAAGCCTTCCAGGAAAGGTCAAGGAGCAAATTATTCCGCCTTTGCAATTTTTAGAAGTCCACCAGAGGCAGATGGGGCCTATGAAAATGTCCAAGGAAGCCAATTAAAGGATACATATGGACATCCCCAGAAGCTTGTAACATTCCGTCTAAGTACAGGCTTATCTGTCAATCTCTTTGTTCGGAAAATGGTAACTGAAGAACCCAATGACCAGACTCCATCTAAGAGGGCTTTACAAATTAATGAGGCAGTTGATGTTTCAAAGAAAGCAAAGATGGATCCAAAAATTGAAGAGGATGCCTCTGCAGGCTTTGGCAAGGGTGACACTGATGCCCATTCGAAAGAAATTGAAGCACTCAATCAACAATTGAAGCAAAGTGAAATGGTGATTGAATCATTGAGGAAACAGTTGACACAAAAAGATTTTGAAATATCCATGCTGCATAAAATGATATCCTCTAAAAAGAAAAAGAAACAAACAGTGTAG 1530 0.3895 MEDKIETADKKVLVDIVKLAQKRGLKGNLGGWKEFLNSHDKKFGAGLSDPSKRSHEVLAAFLKTFSKEEDLKFFDNIMRHHSNQYMLERLKDKSHDSPEQRLVQATLQHPLYPLDYSFPSIDEGWIVVNFKNKPKVMKSTEMVAVDCEMVLCEDGTEAVVKVCVVDHNLEVKLDKLVKPDKEIADYRTEITGVSSQDLEAVTCSLADIQKYMKKLLSSGIILVGHSLHNDLRVLKLDHVRVIDTSYIFQSLDGSIHKRPSLNSLCQAVLHHEVREKGAPHNCLDDAKAAMDLVLAKIKHGVDKEFPIALVQEHVPESELAKLLLHKIPNTVNIETLHKILPGNFKIELKPSRKGQGANYSAFAIFRSPPEADGAYENVQGSQLKDTYGHPQKLVTFRLSTGLSVNLFVRKMVTEEPNDQTPSKRALQINEAVDVSKKAKMDPKIEEDASAGFGKGDTDAHSKEIEALNQQLKQSEMVIESLRKQLTQKDFEISMLHKMISSKKKKKQTV 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01551 509 PANTHER SMALL RNA DEGRADING NUCLEASE 2 8 433 - -
Gma17g01551 509 Gene3D - 137 312 IPR036397 GO:0003676
Gma17g01551 509 SUPERFAMILY Ribonuclease H-like 142 298 IPR012337 -
Gma17g01551 509 CDD REX1_like 143 294 IPR034922 -
Gma17g01551 509 MobiDBLite consensus disorder prediction 437 458 - -
Gma17g01551 509 SMART exoiiiendus 141 302 IPR013520 -
Gma17g01551 509 Coils Coil 457 484 - -
Gma17g01551 509 Pfam Exonuclease 143 292 IPR013520 -
Gma17g01551 509 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 8 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01551 Gma-Chr17 15783097 15787334 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01551 85 238 C2H2 Transcription Factor Family AT2G48100 30.675 2.31e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01551 K14570 - gmx:100785565 994.956