Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01548 ATGAGTCTCCTCTTTCCAACTTTGATAATCTCATTGGTTATTCTTCTCGTCACTGTTAACCAATGTTGCGCTCTCAGTAGAGACGGTGTTCTGTTACTCTCCTTCAAGTACGCTGTGTTGAACGACCCACTCTACGTTCTTGCAAACTGGAACTACAGTGATGAGACTCCATGTTCCTGGAACGGAGTTTCTTGTTCCAACGAAAACCGCGTCACGTCGTTGTTGCTTCCCAATTCTCAGTTTCTAGGTTCGGTTCCTTCCGATCTGGGTTCTATTGAACACCTTCAAATTCTTGACCTTTCCAACAACTCCCTTAACGGGTCTCTTCCTTCGTCTCTCTCCCAAGCCTCCGAGCTTCGGTTCCTGAACCTGTCTAATAACCTTATCACAGGTGAGGTTCCGGAGTCCTTGTCTCAGCTTCGGAATCTTGAGTTTCTTAACCTCTCCGACAATGCCTTGGCGGGAAAATTGCCTGAAAGTTTTTCCAACATGCAAAACCTAACTGTTGCTTCGTTCAAGAACAATTACTTGTTCGGCTTTCTTCCCAGCGGGTTAAGAACGTTGCAGGTTTTGGATCTGTCTTCAAACCTCTTGAACGGTTCTCTTCCCAAGGATTTCGGCGGTGATAATATGCGTTACTTGAACATCTCCTACAACAGATTCTCCGGCGAAATCCCGACGGAGTTCGCGGCGGAGATTCCGGGGAACGCCACCGTTGATCTCTCCTTCAACAACTTAACCGGCGAGGTTCCAGACTCCACTGTGTTCACGAATCAGAATTCGAAGTCTTTCAACGGCAACTTTAATCTGTGTGGAGAAATAACAAAGAATCCTTGTCCTATTCCTTCTTCGCCGTCGTCGGAGCCAAAAGCTTCTGCTCCTATTTCTCCTCCTGCAATCGCCGCAATACCGAAGAGTTTCGATGATTCTCCTTTGGCGCCGACGGGGCAGAAACAGAGGGGTCTCAAACAAGGAACGATCATAGGAATCGTGGTCGGAGACATAATCGGCGTGGGAATCTTGGCCATGCTGTGTGTCTACGTGTACCGTTTGAAGAAAAAGAAGGATGCGGAGAGCACAAAGAAGAAGAACGAAGCGGCTATAACAAGAAGCAGAAGCGAGAGTTCCTCGTCAACAACCTCAGAATCCAGAGGCTTCACGAGGTGGTCGTGTTTGAGGAAGAGAACGGAAGAGGAAGATTCTTCCGAGACAACAAGCTCTTCCGAAAGTGAAGTGGAGGGAGCCACGGCGGCGACACATGATAATAATAATAATAACAACACGGGGACTCTAGTTACTGTGGACGGTGAACGACAACTGGAGGTCGAAACGCTGCTGAAGGCTTCCGCGTACATATTGGGTGCCACGGGGTCCAGCATAATGTACAAGGCAGTTCTGGAAGACGGCACGTCGTTAGCGGTTAGGAGAATCGGCGAGAGTGGCGTGGAGCGGTTCAAGGACTTCGAGAACCAAGTTCGGCTTATTGCTAAACTGGTGCACCCTAATCTGGTTCGCGTTCGTGGATTCTATTGGGGACACGACGAGAAGCTCATCATCTACGACTTCGTTCCAAACGGTTGCCTCGCCAATGTTCGTTACAGGAAAGTGGGGTCCTCGCCGAGTCATTTACCGTGGGAAATCCGGCTCAAGATAGCTAAAGGAGTGGCACGTGGGCTGACTTACCTCCACGAGAAGAAGCACGTGCATGGAAACTTGAAGCCCAGCAATATTCTATTGGGCAACGACATGGAGCCCAAGATTGGAGACTTCGGGCTTGAGAGGATAGTGACGGGTGACACAAGCTATAAAGCTGGCGGGTCCGCGCGTATTTTTGGGAGCAAGAGATCCACGGCATCACGAGATAGTTTCCAAGACATGACGTTTGGGCCTAGCCCGAGCCCGAGCCCAAGCTCAATAAGTGGTGTGTCTCCTTATCATGCTCCTGAGTCGCTCAGGAACTTGAAGCCTCACCCCAAGTGGGACGTGTACTCTTTTGGGGTAATGTTTCTTGAGTTGCTAACGGGAAAGATTGTGGTTTTGGATGATATGGGCCAGGGTCCCGGGCTTTTGGTGGAGGATAAGAACCGGGCCTTGCGCATGGTTGATATGGTTATACGGGCCGACATGGAGGGTAGGGAGGAGGCCTTGTTGGCCTACTTCAAGCTAGGGTATAGTTGTGTCTCTAGCATTCCCCAGAAAAGGCCTCCAATGAAAGAGGCACTACAAGTTCTTGAAAAGATCTCATCCTCCTTCTCTTCTTCTTCCTCTTATCATTATAGCGTCTAA 2286 0.4943 MSLLFPTLIISLVILLVTVNQCCALSRDGVLLLSFKYAVLNDPLYVLANWNYSDETPCSWNGVSCSNENRVTSLLLPNSQFLGSVPSDLGSIEHLQILDLSNNSLNGSLPSSLSQASELRFLNLSNNLITGEVPESLSQLRNLEFLNLSDNALAGKLPESFSNMQNLTVASFKNNYLFGFLPSGLRTLQVLDLSSNLLNGSLPKDFGGDNMRYLNISYNRFSGEIPTEFAAEIPGNATVDLSFNNLTGEVPDSTVFTNQNSKSFNGNFNLCGEITKNPCPIPSSPSSEPKASAPISPPAIAAIPKSFDDSPLAPTGQKQRGLKQGTIIGIVVGDIIGVGILAMLCVYVYRLKKKKDAESTKKKNEAAITRSRSESSSSTTSESRGFTRWSCLRKRTEEEDSSETTSSSESEVEGATAATHDNNNNNNTGTLVTVDGERQLEVETLLKASAYILGATGSSIMYKAVLEDGTSLAVRRIGESGVERFKDFENQVRLIAKLVHPNLVRVRGFYWGHDEKLIIYDFVPNGCLANVRYRKVGSSPSHLPWEIRLKIAKGVARGLTYLHEKKHVHGNLKPSNILLGNDMEPKIGDFGLERIVTGDTSYKAGGSARIFGSKRSTASRDSFQDMTFGPSPSPSPSSISGVSPYHAPESLRNLKPHPKWDVYSFGVMFLELLTGKIVVLDDMGQGPGLLVEDKNRALRMVDMVIRADMEGREEALLAYFKLGYSCVSSIPQKRPPMKEALQVLEKISSSFSSSSSYHYSV 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01548 761 MobiDBLite consensus disorder prediction 407 431 - -
Gma17g01548 761 PRINTS Leucine-rich repeat signature 95 108 - -
Gma17g01548 761 PRINTS Leucine-rich repeat signature 185 198 - -
Gma17g01548 761 Gene3D Ribonuclease Inhibitor 24 184 IPR032675 -
Gma17g01548 761 SUPERFAMILY Protein kinase-like (PK-like) 452 750 IPR011009 -
Gma17g01548 761 Gene3D Transferase(Phosphotransferase) domain 1 524 758 - -
Gma17g01548 761 Gene3D Phosphorylase Kinase; domain 1 409 522 - -
Gma17g01548 761 ProSiteProfiles Protein kinase domain profile. 447 747 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g01548 761 Pfam Leucine rich repeat 94 153 IPR001611 GO:0005515
Gma17g01548 761 Pfam Leucine rich repeat N-terminal domain 27 66 IPR013210 -
Gma17g01548 761 SMART LRR_typ_2 185 208 IPR003591 -
Gma17g01548 761 SMART LRR_typ_2 140 163 IPR003591 -
Gma17g01548 761 SMART LRR_typ_2 92 116 IPR003591 -
Gma17g01548 761 Pfam Protein kinase domain 453 742 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g01548 761 PANTHER BNAC07G16060D PROTEIN 10 750 - -
Gma17g01548 761 Gene3D Ribonuclease Inhibitor 185 281 IPR032675 -
Gma17g01548 761 MobiDBLite consensus disorder prediction 279 320 - -
Gma17g01548 761 SUPERFAMILY L domain-like 27 272 - -
Gma17g01548 761 MobiDBLite consensus disorder prediction 615 645 - -
Gma17g01548 761 MobiDBLite consensus disorder prediction 370 387 - -
Gma17g01548 761 MobiDBLite consensus disorder prediction 615 644 - -
Gma17g01548 761 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 10 750 - -
Gma17g01548 761 MobiDBLite consensus disorder prediction 388 402 - -
Gma17g01548 761 MobiDBLite consensus disorder prediction 359 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01548 Gma-Chr17 15720172 15723398 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01548 8 759 Receptor kinase-like Gene Family AT4G37250 59.818 0.0 854
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gma17g01548 Pkinase 1.3e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01548 - - gmx:100784503 1323.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01548 17 15720172 15723398 Gma05g00960 05 28019679 28023883 GST