Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01542 ATGGTGATGACGATCAATATTGATTGCAATGCCTGCTACAGAAAAGTGAAGAGAGCCCTTCTTAATATGCTAGatggtgaagctgcaactgaggaggtgaaaaagagtaaccatgttttgagaaaattagaaaagcaaaagcagaaccaAGTTCTTGATCCTCACATTGAAGAAAAATTCGGAGGTGGTCGCCTTTTGGCCTGCATCTCATCTCGCCCTGGCCAATGTGGTTGTGCTGATAG 242 0.3099 MVMTINIDCNACYRKVKRALLNMLDGEAATEEVKKSNHVLRKLEKQKQNQVLDPHIEEKFGGGRLLACISSRPGQCGCAD 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01542 80 Gene3D Ribosomal protein S8e, subdomain 11 63 IPR042563 -
Gma17g01542 80 PANTHER RIBOSOMAL PROTEIN S8E FAMILY PROTEIN 25 80 - -
Gma17g01542 80 Coils Coil 26 46 - -
Gma17g01542 80 PANTHER 40S RIBOSOMAL PROTEIN S8 25 80 IPR001047 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01542 Gma-Chr17 15539042 15540175 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01542 26 80 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 69.643 1.18e-21 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01542 K02995 - gmx:100527325 109.768