Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01509 ATGTCACACGAGCTGCCTTCGTCTATCAGGACTTTCCTGACGTCCCAATTGATAATGACAATCATAATTACCATTGGGTCTTCTTGCTCAAGATCGAATCTTGTGAAGTCGACATCGGTGAACGTATTTGGTGGGATTGATCTCCTCAAGCCCGCTGCAATTGGGAAGtcttcagtgcttcattcacaaccaaagtcaactgtgggaactcctgcatatattgctccagaagtattgttgaaacaagagtatgatggcaagcttgcagatgtctggtcatgtggagtaacgttatatgtgatgctagtgggagcatatccttttgaagatcctaatgaaccaaaggactttcgcaagacaattcagAGAGTTCTTAGTGTCCAGTATTCCATTCCGGGCGGTGTTCAAATATCTCCAGAGTGTGGCCACCTTATCTCAAGGATCTTTGTTTTTGACCCAGCAGAGgaatcgcaacgagaggtgtacctaggagcttacttaaatcagggccattggcaactggtagtactgtgtcctgcgaccaatgttgttgcatggttttgttcgttacgtaagaagcctgatactcatatcaaaactgcaattaacaatgcaatgaagtcagcaaacacaaccgcggatggtacaaataatccagcaactcctaagtgggttgaagtcaagagccatgtacaaagcggagggtatgagtgtggctactacgtgatgcattggatgtggaacatcgtcggtgggggtttaaagaatgattggagcatgtggtttcttgatggaacggcATTTAGAGTGAATGATGGGGAGGACACCTACACAACTCTTCCAAGAATAGACCCTTCTGTGAGCCAAAGGATCCCGACACAACATGTGTCTAGAAATGCAACCATATATTGCAGCACTGAAATTTTGTCACTTGACTGGGAATGTAAATCAGACCGCTTGCTTCTTATAGGTACATCCGATGGGTGCATTAAGGCATGGAATGTGGATGCAAAGAGAGTTGTCTGTGACCTCAACACAACCGAAGCATTTCCAACTGTATTGGACATAAAGTGCAGTCCTGTGGAACCTATTTTTGTGTCTGCAGCAGCATCTGGAGGGGCTGGTTCTAACTATATTGACAACCTGGGTTTTGCTTCACTTACTGTGTGGAACATGAAGACATGGAAAGCCATGACAGTCCTTCCTCTTGGAGAAGATCCACCAGCAATTACTTCTCTATGCTTTAATCACAATGGAAAGATTTTGGCAGCTTCTGCCgttgatggaatgattcacatgtttgACATGTCTGCTGGTCTACAAATCACTGGCTGGCCTGCACATGATTCTTCCATCAGTTCAATTCTGTTTGGACCAGATGAGACTAGCATTTTTAGCCTGGGCTCTGATGGGAAGGCAAGTATTATAAATTTAATGTTATTCCAGCTTGTGAAATGGGTTGTACATTTATATTAA 1476 0.2717 MSHELPSSIRTFLTSQLIMTIIITIGSSCSRSNLVKSTSVNVFGGIDLLKPAAIGKSSVLHSQPKSTVGTPAYIAPEVLLKQEYDGKLADVWSCGVTLYVMLVGAYPFEDPNEPKDFRKTIQRVLSVQYSIPGGVQISPECGHLISRIFVFDPAEESQREVYLGAYLNQGHWQLVVLCPATNVVAWFCSLRKKPDTHIKTAINNAMKSANTTADGTNNPATPKWVEVKSHVQSGGYECGYYVMHWMWNIVGGGLKNDWSMWFLDGTAFRVNDGEDTYTTLPRIDPSVSQRIPTQHVSRNATIYCSTEILSLDWECKSDRLLLIGTSDGCIKAWNVDAKRVVCDLNTTEAFPTVLDIKCSPVEPIFVSAAASGGAGSNYIDNLGFASLTVWNMKTWKAMTVLPLGEDPPAITSLCFNHNGKILAASAVDGMIHMFDMSAGLQITGWPAHDSSISSILFGPDETSIFSLGSDGKASIINLMLFQLVKWVVHLY 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01509 491 SMART WD40_4 295 334 IPR001680 GO:0005515
Gma17g01509 491 SMART WD40_4 438 477 IPR001680 GO:0005515
Gma17g01509 491 SMART WD40_4 394 435 IPR001680 GO:0005515
Gma17g01509 491 Gene3D - 288 372 IPR015943 GO:0005515
Gma17g01509 491 SUPERFAMILY Protein kinase-like (PK-like) 64 158 IPR011009 -
Gma17g01509 491 Gene3D - 373 484 IPR015943 GO:0005515
Gma17g01509 491 Gene3D Adenoviral Proteinase; Chain A 158 269 - -
Gma17g01509 491 Pfam Protein kinase domain 59 154 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g01509 491 Pfam Anaphase-promoting complex subunit 4 WD40 domain 404 457 IPR024977 -
Gma17g01509 491 SUPERFAMILY WD40 repeat-like 304 484 IPR036322 GO:0005515
Gma17g01509 491 SMART serkin_6 19 162 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g01509 491 Gene3D Transferase(Phosphotransferase) domain 1 36 157 - -
Gma17g01509 491 SUPERFAMILY Cysteine proteinases 168 265 IPR038765 -
Gma17g01509 491 ProSiteProfiles Protein kinase domain profile. 1 174 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g01509 491 PANTHER OS05G0299300 PROTEIN 295 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01509 Gma-Chr17 14900493 14920298 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01509 51 153 CBL-interacting serine-threonine protein kinases AT5G10930 45.631 1.72e-19 89.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Gma17g01509 Pkinase 1.2e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01509 K24760 - gsj:114371858 401.364