Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01500 ATGACGCAATTCACACCCCCACTTCCTCCTTTGCACCACCAAATCACATCCCTCCTCCCAAACCCTAACATGATGAACAAAAACCAAATCCCTAGGCCTAGGCCTTGGCCTGCTTCAGGCTTCCCTACTACCTCCAAGGCCCTTTCCAACTTGGGCAACGCGAACTGCATGGAACAGTTACTTGTTCACTGCGCCAACGCTATTGAAACCAACGACGTAACCCTCGCACAACAGATCCTTTGGGTGCTTAACAACATAGCCCCCCATGATGGCGACTCCAACCAACGCCTTGCCTCTGGCTTCCTCCGCGCCCTCACCGCACGTGCGGCCAAAACTGGTACGTGCAAGATGCTCGTCTCCGCCGGCACCAACCTCTCCATCGACACGCACAGATTTAACATCATTGAGCTCGCTAACTTCGTCGACCTAACCCCGTGGCACCGCTTCGGCTTCACCGCCGCCAACGCCGCCGTCTTGGAAGCCACCGAAGGGTTCTCCGTTGTACATATTGTGGACTTGAGCTTGACGCATTGCATGCAAATTCCCACACTTGTCGACGCCATCGCCAGCCGCCAGCACCACGACGCGCCGCCGCCGATAATCAAGCTCACGGTGGCCGACGCTTGCTGCAGGGACCACATCCCTCCCATGCTCGACCTCTCCTACGAGGAACTCGGCGCCAAGCTGGTGAGTTTCGCTCGGTCGAGAAACGTGATCATGGAATTCAGAGTGGTTTCTTCGAGTTATCAAGACGGGTTCGCGAGTTTGATCGAACATTTAAGAGTGcaacaagaacaacaacaacaacaacaacaacaGCATTTTGTTTATGCAGCAGAACCTAGTACTCCGAGTGAGGCTTTGGTTATAAACTGTCACATGATGCTTCATTACATCCCCGACGAAACCCTATCAGATACAACAGACTTGACCTCTTATGTCTACGATTCTTCTTCTTCTGCTGCCGTTAGTGTTACTCCCACTTCTTCACTGCGATCACTGTTCCTTAAGTCCCTGCGAGGTTTGGACCCAACGGTCGTGATCTTGGTCGACGAAGACGCGGATTTGACATCAAACAACTTGGTATGCAGACTAAGATCAGCATTTAACTTCCTATGGATCCCTTACGACACCGTGGACACGTTCTTGCCGCGAGGGAGCAAGCAGAGACAGTGGTACGAGGCAGACATATGCTGGAAGATTGAGAATGTGATTGCACACGAAGGGCTTCAGAGGGTGGAGAGGGTAGAACCTAAGAACAAGTGGGAGGAGCGAATGAAGAATGCGAGTTTTCAAGGGGTTGGTTTCAGTGAAGACTCTGTTGCAGAAGTGAAGGCAATGCTCGATGAACATGCTGCTGGGTGGGGATTGAAGAAGGAAGATGAACACATTGTGCTCACTTGGAAAGGACACAATGTAGTCTTTGCCTCTGCTTGGTTACCTGCTTGA 1449 0.51 MTQFTPPLPPLHHQITSLLPNPNMMNKNQIPRPRPWPASGFPTTSKALSNLGNANCMEQLLVHCANAIETNDVTLAQQILWVLNNIAPHDGDSNQRLASGFLRALTARAAKTGTCKMLVSAGTNLSIDTHRFNIIELANFVDLTPWHRFGFTAANAAVLEATEGFSVVHIVDLSLTHCMQIPTLVDAIASRQHHDAPPPIIKLTVADACCRDHIPPMLDLSYEELGAKLVSFARSRNVIMEFRVVSSSYQDGFASLIEHLRVQQEQQQQQQQQHFVYAAEPSTPSEALVINCHMMLHYIPDETLSDTTDLTSYVYDSSSSAAVSVTPTSSLRSLFLKSLRGLDPTVVILVDEDADLTSNNLVCRLRSAFNFLWIPYDTVDTFLPRGSKQRQWYEADICWKIENVIAHEGLQRVERVEPKNKWEERMKNASFQGVGFSEDSVAEVKAMLDEHAAGWGLKKEDEHIVLTWKGHNVVFASAWLPA 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01500 482 MobiDBLite consensus disorder prediction 18 42 - -
Gma17g01500 482 Pfam GRAS domain family 57 479 IPR005202 -
Gma17g01500 482 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 32 480 IPR005202 -
Gma17g01500 482 PANTHER SCARECROW-LIKE PROTEIN 32 32 480 - -
Gma17g01500 482 ProSiteProfiles GRAS family profile. 48 480 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01500 Gma-Chr17 14738881 14740329 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01500 25 481 GRAS Transcription Factor Family AT3G49950 55.870 3.36e-177 501
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma17g01500 GRAS 9.2e-85 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01500 - - gmx:100808898 917.531