Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01490 ATGGGAGAGTCTGAGTTTGTTCCTTCGGTGGCTGTGAGTGTGAGAGAGTTTGATCCAACTAAAGACATAGAGAAAGTGGAAGCCGTTGAAAGAATATGTGAGGTTGGACCCAGTGGAAAGCTTTCCCTCTTCACCGACCTCCATGGTGACCCAATTTGCAGGGTCCGCAACTCACCTACTTTCCTCATGCTGATAGCCGAAATTGGCCAAGAGACAGTAGGAATGATAAGAGGTTGCATCAAAACCGTTACTTGCGGAAAAAAGCTCCACAGGCAAGGAAAAAACAACACCGAGCCAAAACAAGTCCCTATTTACACCAAACTAGCCTACATATTAGGCCTTCGTGTTTCTCCACATCACAGGAGAATGGGAATAGGGATGAAGCTTGTGAAGAAAATGGAGGAATGGTTCAGGGATAACGGGGCAGAGTATGCATACATGGCTACGGAGAAGGACAACGTTGCATCCGTCAAGTTGTTCACCGACAAATGTGGGTACTCAAAGTTTCGTACCCCCTGCATTCTCGCGAATCCTGTTTTCTCGCATCCTGCTAGAATCTCTCACAAAGTGACTATCATTGAACTCTCTCCGAGCGATGCCGAAATACTCTACCGCAGCAAGTTTTCCACAACGGAGTTCTTCCCGCGCGACGTAGACTCCGTTCTCCGTAATAAGCTCTCCTTAGGCACTTTTCTTGCCGTCCCCAAAGGCTTGTACCGGGCTGACACGTGGCCCGGCTCAACCCGCTTTCTTGAGGGTCCACCACCCTGTTCTTGGGCCCTAGTCAGTGTGTGGAACTGCAAGGACGTGTTCACACTGGAGGTAAAAGGTGCTTCGCGCGTGAAGAAGACGCTCGCCAAGACCACTCGCGTCCTCGATCGTGCCTTCCCCTGGCTGCGCTTGCCCTCCGTTCCTAATTTCTTTGAGCCCTTCGGGTTTCATTTTTTGTATGGGCTTGGAGGAGAGGGCCCGCAGGCCCAGAAGATGATCCGGGCTTTGTGCGGGTTTGCCCATAACCTCGCCCGGGATCGCGGCTGTGAGGTTGTGGCCACCGAAGTTTCAAGCCAAGAACCGTTACGGTGCGCTATCCCGCACTGGAAAATGCTCTCATGCGAAGAAGATCTGTGGTGCATTAAGAGATTAGGAGAAGATTACAGTGATGGCTCTCTGGGTGATTGGACTAAATCCCCTCCAGGCTTCTCAATTTTTGTTGATCCCAGAGAAGTTTGA 1230 0.5081 MGESEFVPSVAVSVREFDPTKDIEKVEAVERICEVGPSGKLSLFTDLHGDPICRVRNSPTFLMLIAEIGQETVGMIRGCIKTVTCGKKLHRQGKNNTEPKQVPIYTKLAYILGLRVSPHHRRMGIGMKLVKKMEEWFRDNGAEYAYMATEKDNVASVKLFTDKCGYSKFRTPCILANPVFSHPARISHKVTIIELSPSDAEILYRSKFSTTEFFPRDVDSVLRNKLSLGTFLAVPKGLYRADTWPGSTRFLEGPPPCSWALVSVWNCKDVFTLEVKGASRVKKTLAKTTRVLDRAFPWLRLPSVPNFFEPFGFHFLYGLGGEGPQAQKMIRALCGFAHNLARDRGCEVVATEVSSQEPLRCAIPHWKMLSCEEDLWCIKRLGEDYSDGSLGDWTKSPPGFSIFVDPREV 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01490 409 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 47 168 IPR016181 -
Gma17g01490 409 CDD NAT_SF 63 146 - -
Gma17g01490 409 Pfam Acetyltransferase (GNAT) family 56 166 IPR000182 GO:0016407
Gma17g01490 409 PANTHER N-ACETYLTRANSFERASE HLS1-LIKE-RELATED 10 408 - -
Gma17g01490 409 PANTHER N-ACETYLTRANSFERASE 10 408 - -
Gma17g01490 409 Gene3D - 20 172 - -
Gma17g01490 409 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 12 185 IPR000182 GO:0016407
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01490 Gma-Chr17 14337828 14339886 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Gma17g01490 Acetyltransf_1 2.8e-17 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01490 - - gmx:100804109 848.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01490 17 14337828 14339886 Gma05g01057 05 30243066 30244592 GST
Gma01g01959 01 55065061 55067188 Gma17g01490 17 14337828 14339886 PCT
Gma11g00448 11 3719471 3720933 Gma17g01490 17 14337828 14339886 PCT
Gma17g01490 17 14337828 14339886 Gma01g01959 01 55065061 55067188 PCT
Gma17g01490 17 14337828 14339886 Gma11g00448 11 3719471 3720933 PCT