Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01487 ATGAAAGCTCATCATCATTTGAGCTTCTTTTTTATAATATCATCGTTCTCTCTATTCTTCTCCACTTCCAAAGCTACTATTACCAACACAACTCAATTATCCTCTTACAATGAAACAAGAACAAGAAGGATTCTCCACCAGCCATTGTTCCCGGCGGTGTCGGCTCCACCGCCGGTTACTCCACCGCCGCCACCACCACCGGACATTCCGTCCTCTCCCGACATTCCTTTCTTCAACGAGTATCCCGCCGGGCAGCCGCCTCCCGTGCAGAACCTGCCGCCGGCGAAGACCTCCGGCGGCGTGATTGCGAACCCGACGGCGACGCAGCCAACGAAACCGGGGAAGAAGGTGGCGATTGCGATCTCCGTGGGCATTGTTACACTTGGAATGTTCTCCGCATTGGGCTTCTTCTTATACAGACACAGAGTAAGACACCCGGCGGAGACACAGAAACTTGTTTCTCGCAGGGTTCTAGAAGATTCTCCGCGGGCCCCACCGCTGCCACCACCCTCGAGTTTTCTCTACATTGGCACGGTGGAGCCCGCCAGAACTTCGCTGAGCGAACCCAACAGAATGACCGTTAACACTTCCCCTTACCGGAAACTTGATTCCATTAAGCTTAGCTCCGATCACCGTTACCGCCCCAGCCCAGAGCTGCAGCCGCTTCCGCCGCCGCACAAGCCCCCGGACGAGAGCCACTCGCCGCCGGCGGAATTCTCTGACTCGTCATCGTCCTCCGAGGAGGAAAGCTGCGAGACGGCGTTCCACTCGCCGCGCGGCTCGTCGCTCGGCCGCGAAGAGAATTTCTTCACGCCGGTCTCGCGCCACAGCTGTCTCTCCGCCGCCGCGTCGGTGGTTCCTTACTCGAAGAGAACTTCGCCGAAATCCCGGTTTTCGGCCCCGTCGCCGGATATCAGAAACATGGTCGTCCCGTCCGTTAGGCCTTCTCCGGCAGAATTACCGGCGCCGGCAGATTCAACAACATTTCATCCCGTGAAAAAAGAAATGACTTTGGGTCCATCTAGAAGACCCAAATTCTCATCGCATCCCCCAGCACCGAATTTGACTCATCTTCATTCAAACGAGTCCACTACTTCACTTAAACCTCCTCCTCCTCCTCCGCCACCGCCGCCGCCACCACTTCCGTCGCGAAAGGGTTGGTCTCCGTCAATTAGTTCATCTTCTTCCTCTGTGTCGAGGAAGAACCGAGAGTCATGGTCCCCATATGAAGGAGAATCTTCTGGTAACAGTGTTAGTGTAAGGAAAGGTCCTTCTTCTGAGGAAGTTTACAAAAGGCGTGAAGGTGATGACGTGGATGGAGCAAAACCCAAGTTGAAGGCTCTGCATTGGGATAAAGTGTCTGCTACTTCGGACCGTGCCACTGTGTGGGACCAGTTAAAATCCAGCTCCTTTCAGTTAAATGAGGACATGATGGAGACACTGTTTGGCTGCAAATCCACAGGTTCTGCTTTTAAAGAGAGTGTTACTAGAAGATCAGTTCTTCCTCCTGTTGAACCGGAGAATAGGGTGTTGGATCCCAAGAAATCTCAAAACATAGCTATACTTCTCAGGGCACTCAACGTGACAAGAGATGAGGTGTGCGAAGCTCTTTTAGATGGGAATCCTGAAGGTTTGGGAACTGAGCTATTGGAGACTCTAGTGAAGATGGCTCTAACAAAGGAGGAAGAAATAAAACTTAAAAATTATGATGGTGACCTCTCAAGACTTGGATCTGCAGAAAGATTTCTTAAAGCAGTGCTTGATATCCCTTTAGCTTTTAAGAGAATTGAAGCCATGCTGTACAGAGCTAATTTTGAAACTGAAGTTAACTACCTTAGGAAGTCCTTTCAGACCCTGGAGGCAGCAAGTGAGGAATTAAAGAACAGTCGGTTATTCCTCAAACTTCTTGAAGCTGTTCTAAGGACAGGAAACAGAATGAATGTTGGCACAAATCGCGGTGGCGCTAAATCTTTCAAACTGGACACACTTCTAAAACTTGTAGACATAAAGGGCACAGATGGCAAGACAACACTGCTCCACTTTGTGGTTCAAGAGATCATTAGATCCGAAGGAACAGGCGGAGAATCTGCAGACGAGAATGTTCAAAACCAATCAAATTCCCAATTCAACGAGGATGAGTTCAGAAAGAAAGGATTGCAGGTTGTGGCTGGACTGAGTAGAGACCTTGGTAATGTCAAAAAGGCAGCAGGAATGGATTCGGATGTTTTAAGCAGCTATGTCTCAAAGCTTGAAATTGGACTTGACAAAGTGAGATTAGTTTTGCAATGTAGAAAGCCAGATATGCACGGGAATTTCTTTAACTCGACCGCACTGTTTCTGAAAGATGCTGAAGAGGAAATTGTTAGGATCAAGGCTGATGAGAGAAAGGCCTTGTTCCTTGTGAAAGAAGTTACAAAATACTTTCACGGGGATGCAGCAAAGGAAGAAGCGCACCCTTTCCGAATTTTTATGGTTGTAAGAGACTTTCTAAATAGTTTGGATCAAGTCTGCAAAGAAGTGGGGAGGATGCAGGATAGGACTGTGATTGGTTCAGCTAGATCCTTCAGGATAGCCGCAAGTGCATCCTTACCTGTTCTCAACAAGTACCATGCAAGACAAGATAGAAGTTCAGATGAGGAAGGCTTATCCCCCTAG 2655 0.49 MKAHHHLSFFFIISSFSLFFSTSKATITNTTQLSSYNETRTRRILHQPLFPAVSAPPPVTPPPPPPPDIPSSPDIPFFNEYPAGQPPPVQNLPPAKTSGGVIANPTATQPTKPGKKVAIAISVGIVTLGMFSALGFFLYRHRVRHPAETQKLVSRRVLEDSPRAPPLPPPSSFLYIGTVEPARTSLSEPNRMTVNTSPYRKLDSIKLSSDHRYRPSPELQPLPPPHKPPDESHSPPAEFSDSSSSSEEESCETAFHSPRGSSLGREENFFTPVSRHSCLSAAASVVPYSKRTSPKSRFSAPSPDIRNMVVPSVRPSPAELPAPADSTTFHPVKKEMTLGPSRRPKFSSHPPAPNLTHLHSNESTTSLKPPPPPPPPPPPPLPSRKGWSPSISSSSSSVSRKNRESWSPYEGESSGNSVSVRKGPSSEEVYKRREGDDVDGAKPKLKALHWDKVSATSDRATVWDQLKSSSFQLNEDMMETLFGCKSTGSAFKESVTRRSVLPPVEPENRVLDPKKSQNIAILLRALNVTRDEVCEALLDGNPEGLGTELLETLVKMALTKEEEIKLKNYDGDLSRLGSAERFLKAVLDIPLAFKRIEAMLYRANFETEVNYLRKSFQTLEAASEELKNSRLFLKLLEAVLRTGNRMNVGTNRGGAKSFKLDTLLKLVDIKGTDGKTTLLHFVVQEIIRSEGTGGESADENVQNQSNSQFNEDEFRKKGLQVVAGLSRDLGNVKKAAGMDSDVLSSYVSKLEIGLDKVRLVLQCRKPDMHGNFFNSTALFLKDAEEEIVRIKADERKALFLVKEVTKYFHGDAAKEEAHPFRIFMVVRDFLNSLDQVCKEVGRMQDRTVIGSARSFRIAASASLPVLNKYHARQDRSSDEEGLSP 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01487 884 MobiDBLite consensus disorder prediction 286 300 - -
Gma17g01487 884 SUPERFAMILY Formin homology 2 domain (FH2 domain) 370 845 - -
Gma17g01487 884 PANTHER FORMIN-LIKE PROTEIN 4 884 - -
Gma17g01487 884 MobiDBLite consensus disorder prediction 366 385 - -
Gma17g01487 884 PANTHER FORMIN-RELATED 4 884 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Gma17g01487 884 MobiDBLite consensus disorder prediction 285 440 - -
Gma17g01487 884 MobiDBLite consensus disorder prediction 186 268 - -
Gma17g01487 884 MobiDBLite consensus disorder prediction 386 423 - -
Gma17g01487 884 Pfam Formin Homology 2 Domain 440 833 IPR015425 -
Gma17g01487 884 Gene3D Formin, FH2 domain 437 845 IPR042201 -
Gma17g01487 884 MobiDBLite consensus disorder prediction 236 257 - -
Gma17g01487 884 SMART it6_source 435 848 IPR015425 -
Gma17g01487 884 MobiDBLite consensus disorder prediction 425 440 - -
Gma17g01487 884 ProSiteProfiles Formin homology-2 (FH2) domain profile. 435 859 IPR015425 -
Gma17g01487 884 MobiDBLite consensus disorder prediction 186 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01487 Gma-Chr17 14246187 14250519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01487 433 874 FH2 protein (formin) Gene Family AT5G67470 73.767 0.0 632
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01487 - - gmx:100803578 1554.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01487 17 14246187 14250519 Gma05g01061 05 30327054 30331571 GST
Gma01g01961 01 55093047 55097863 Gma17g01487 17 14246187 14250519 PCT
Gma11g00446 11 3685670 3690895 Gma17g01487 17 14246187 14250519 PCT
Gma17g01487 17 14246187 14250519 Gma01g01961 01 55093047 55097863 PCT
Gma17g01487 17 14246187 14250519 Gma11g00446 11 3685670 3690895 PCT