LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma17g01477	ATGGCGGCTTTGTCTTCGAGCTGTAGCACATCCCTTCCCAAAATTTCCTCCCATCGATTCAATTTCTATCCACACCACCTAAATTTACCTCCTTGGCCCCCAAAATCAATGCCAAACAATCCCTTATCACTCTCAACAACTTGCAAACGCCGCAACGTGTTCAGCGAAGAATTCAACGGAAGCGTGGCAGAAGAGGAGAGTTTCAGCTCCATGGACGACAAGCAATTCGTGCGTTGGTTCCGCGAGACGTGGCCTTACTTGTGGGCCCACCGTGGCGCTACCTTCGTTGTCATTATTTCCGGTGAAATTGTCACTAGTCCCTTATTGGATCCCATTCTCAAGGATATAGCCTTCCTTCATCACCTGGGAATCCGGTTTGTTCTTGTTCCGGGGACCCATGTGCAAATTGACAATCTTTTGCGTGAGAGAGGGAGACAGCCTAAGTATGTTGGTCCATATAGGATAACTGATGATGAGTCTCTAGCAGCTGCAATGGAAGCAGCTGGGAGAATAAGATTGATGATTGAAGCAAAGCTTTCTCCTGGACCCTCCATTTACAATATTCGTCGACATGGTGACAATAGCCGTTTGCATGAAGTTGGTGTCAGTGTTGCAAGTGGGAACTTTCTTGCAGCCAAGAGAAGAGGGGTTGTCAAAGGAATTGATTTTGGGTCAACTGGGGAGGTTAAAAAAGTAGATATTTCTCGCATGCGTGAGAGGCTTGATGGCAACTGTATTGTTATTTTAAGCAACTTGGGCTACTCCAGCTCTGGAGAAGTATTAAATTGCAATGCCTATGAAGTTGCGACAGCTTGTGCCTTGGCTGTACGAGCTGACAAGCTTATATGCATTACAGATGGTCCAATACTGGATGAAAGTGGACACCTTATTCGTTTCTTGCCTCTTCAAGAGGCAGACATGCTAATTCGTAAACAGGTTGAGGAAAGTGAAACAGCTGCTAACTATGTGAAAGCTGTTGCTGAAGAAAGTTTCAAGTCTCTTAAAAATTTTAATGGGGCAGTCCATTCTCCACGGAACGGAAAACCATTTTCAGAATATCATAATTCAACCTTTCATAATGGTGTTGGTTTTGACAATGGGAATGGCCTATCTGGGAAGCATGGTTTTGCTATTGGAGGTCAAGAGTCACTAAGTCGAACGAATGGTTACCTGTCAGAACTGGCTGCTGCAGCCTTCGTTTGTAGAGGTGGTGTTCAAAGAGTTCATTTGTTGGATGGCACTATTAGTGGAGTTCTGTTGTTGGAACTGTTCAAGAGAGATGGGATGGGAACAATGGTGGCTAGTGACCTTTATGAAGGCACCCGGATGGCTCAAGTAACAGATTTTTCTGGAATAAAACAACTTATCCAGCCTTTGGAGGAATCTGGTATATTAGTTAAGCGGACTGATGAAGAGCTGCTTCAATCATTAGGCTCCTTCATTGTTGTTGAGAGAGAAGGACAGATAATTGCTTGCGCTGCACTTTTTCCTTTCTTTGAGGAGAAGTGTGGAGAGGTTGCTGCAATTGCAGTATCTCCTGATTGTAGAGGCCAAGGACAGGGAGACAAATTACTTGATTATATAGAGAAGAAGGCATCATCTATAGGATTTGAAATGCTTTTCTTGCTCACAACTCGGACAGCAGATTGGTTTGTAAGGCGTGGATTTTCAGAATGTTCAATTGATTATATACCTGAGAAGAAAAGGAAAACGATTAATCTATCCCGCAAGTCCAAGTATTACATGAAGAAGCTTCTACCTAATAAGAGTGGAATAACTGTTAGTAGCAGATTTACATCCTCTTAG	1806	0.4352	MAALSSSCSTSLPKISSHRFNFYPHHLNLPPWPPKSMPNNPLSLSTTCKRRNVFSEEFNGSVAEEESFSSMDDKQFVRWFRETWPYLWAHRGATFVVIISGEIVTSPLLDPILKDIAFLHHLGIRFVLVPGTHVQIDNLLRERGRQPKYVGPYRITDDESLAAAMEAAGRIRLMIEAKLSPGPSIYNIRRHGDNSRLHEVGVSVASGNFLAAKRRGVVKGIDFGSTGEVKKVDISRMRERLDGNCIVILSNLGYSSSGEVLNCNAYEVATACALAVRADKLICITDGPILDESGHLIRFLPLQEADMLIRKQVEESETAANYVKAVAEESFKSLKNFNGAVHSPRNGKPFSEYHNSTFHNGVGFDNGNGLSGKHGFAIGGQESLSRTNGYLSELAAAAFVCRGGVQRVHLLDGTISGVLLLELFKRDGMGTMVASDLYEGTRMAQVTDFSGIKQLIQPLEESGILVKRTDEELLQSLGSFIVVEREGQIIACAALFPFFEEKCGEVAAIAVSPDCRGQGQGDKLLDYIEKKASSIGFEMLFLLTTRTADWFVRRGFSECSIDYIPEKKRKTINLSRKSKYYMKKLLPNKSGITVSSRFTSS	601

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma17g01477	601	SUPERFAMILY	Acyl-CoA N-acyltransferases (Nat)	442	589	IPR016181	-
	Gma17g01477	601	Pfam	Acetyltransferase (GNAT) family	478	544	IPR000182	GO:0016407
	Gma17g01477	601	Pfam	Amino acid kinase family	94	310	IPR001048	-
	Gma17g01477	601	CDD	AAK_NAGS-ABP	75	433	IPR033719	-
	Gma17g01477	601	Hamap	Amino-acid acetyltransferase [argA].	69	585	IPR010167	GO:0004042\|GO:0005737\|GO:0006526
	Gma17g01477	601	ProSiteProfiles	Gcn5-related N-acetyltransferase (GNAT) domain profile.	439	587	IPR000182	GO:0016407
	Gma17g01477	601	SUPERFAMILY	Carbamate kinase-like	72	435	IPR036393	-
	Gma17g01477	601	PANTHER	AMINO-ACID ACETYLTRANSFERASE	45	592	IPR010167	GO:0004042\|GO:0005737\|GO:0006526
	Gma17g01477	601	Gene3D	-	74	438	IPR036393	-
	Gma17g01477	601	CDD	NAT_SF	480	542	-	-
	Gma17g01477	601	Gene3D	-	439	585	-	-
	Gma17g01477	601	TIGRFAM	N-Ac-Glu-synth: amino-acid N-acetyltransferase	394	585	IPR010167	GO:0004042\|GO:0005737\|GO:0006526
	Gma17g01477	601	TIGRFAM	N-Ac-Glu-synth: amino-acid N-acetyltransferase	76	327	IPR010167	GO:0004042\|GO:0005737\|GO:0006526

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma17g01477	Gma-Chr17	14130651	14137690	Dispersed/Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TR	GNAT	Gma17g01477		AA_kinase	1.1e-11	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma17g01477	K14682		-	gmx:100800925	1186.02

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma17g01477	17	14130651	14137690	Gma05g01073	05	30714277	30736875	GST
	Gma01g01976	01	55203034	55208120	Gma17g01477	17	14130651	14137690	PCT
	Gma11g00432	11	3579696	3585071	Gma17g01477	17	14130651	14137690	PCT
	Gma17g01477	17	14130651	14137690	Gma01g01976	01	55203034	55208120	PCT
	Gma17g01477	17	14130651	14137690	Gma11g00432	11	3579696	3585071	PCT