Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01465 ATGAGACTTATCACAATCCTCTTGTGCTACATGGGCTTTCAGGATTTCTTTGAATCCAACATTACAAGGCCGAAGAGGGCGGTGTCGGTGGTGCTGATGAGGGAAATCCTGCCGGTGGTGAAGTTCTCAGAGATGGAGATGGCGGTGGAGGCAGTAGAGAGTTGCGCAGTGTGCCTGTATGAGTTTGAGGGAGAGGACGAGATCAGATGGTTGACGAACTACCGCCACATATTCCACAAAAGGTGTCTGGACCATTGGATGGGGTACGATATGAGAATGTGCACCCTATGTCGAACACCCTCCATACCCCACCATATGCAAGCTGCCTTCAATGATAAACTTTGGGCTGCTTCAGGGATCCCTGACTTCTATTACTATCATCACTAG 387 0.4935 MRLITILLCYMGFQDFFESNITRPKRAVSVVLMREILPVVKFSEMEMAVEAVESCAVCLYEFEGEDEIRWLTNYRHIFHKRCLDHWMGYDMRMCTLCRTPSIPHHMQAAFNDKLWAASGIPDFYYYHH 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01465 128 ProSiteProfiles Zinc finger RING-type profile. 55 98 IPR001841 -
Gma17g01465 128 SUPERFAMILY RING/U-box 39 104 - -
Gma17g01465 128 PANTHER RING ZINC FINGER PROTEIN-RELATED 3 125 - -
Gma17g01465 128 PANTHER BRH1 RING FINGER PROTEIN 3 125 - -
Gma17g01465 128 Pfam Ring finger domain 54 98 IPR001841 -
Gma17g01465 128 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 16 102 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01465 Gma-Chr17 13977027 13977413 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01465 2 119 C3H Transcription Factor Family AT1G63840 45.038 1.28e-32 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01465 K16281 - gmx:100795608 277.33