Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01459 ATGCTTTCTCTCCCTCCCTCCGACCCCTTCTCCACCTTCTCCGCCGGCTTCACGCCGTGGGACCACGATGAGGATTCCCACGCCCTCTTCTCCCCCAAACCCGTCTCTTCCAGCTCCGGCTCTGACGACAAATCCGAACCGAACCAACATGTATCCGCCTCCTCCACGGCGATGGAGGAGCGGAAACGGCGCCGCATGATATCGAACCGGGAATCGGCCCGCAGGTCCAGGATGCGGAAACAGAGACACCTGGAGAACCTTCGGAACCAGTTGAACAAGTGCAGGGTCGAAAACCGGGAACTGAGTAACCGGTTGCAGTTCGTCCTGCACCACTTGAACCGCCTCCGAACCGAAAACGAATGGTTACACTCCGAGCGAACCTTGCTCCGCCAAAAAGTCGCCAACTTAACACAAATTTTGATTTTCCAACAATTCCAAACTTTCTCCCCTGCATGGACATGCACCAACAACAACACCTCGCTCATGACAATTAATCAAGTTAATTAA 507 0.5424 MLSLPPSDPFSTFSAGFTPWDHDEDSHALFSPKPVSSSSGSDDKSEPNQHVSASSTAMEERKRRRMISNRESARRSRMRKQRHLENLRNQLNKCRVENRELSNRLQFVLHHLNRLRTENEWLHSERTLLRQKVANLTQILIFQQFQTFSPAWTCTNNNTSLMTINQVN 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01459 168 Coils Coil 70 118 - -
Gma17g01459 168 CDD bZIP_plant_GBF1 62 113 IPR045314 GO:0003700|GO:0006355
Gma17g01459 168 PANTHER BZIP TRANSCRIPTION FACTOR 26 155 - -
Gma17g01459 168 SMART brlzneu 57 121 IPR004827 GO:0003700|GO:0006355
Gma17g01459 168 MobiDBLite consensus disorder prediction 31 55 - -
Gma17g01459 168 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 64 79 IPR004827 GO:0003700|GO:0006355
Gma17g01459 168 Pfam bZIP transcription factor 60 119 IPR004827 GO:0003700|GO:0006355
Gma17g01459 168 Gene3D - 59 112 - -
Gma17g01459 168 MobiDBLite consensus disorder prediction 56 74 - -
Gma17g01459 168 PANTHER BZIP TRANSCRIPTION FACTOR 44 26 155 - -
Gma17g01459 168 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 59 122 IPR004827 GO:0003700|GO:0006355
Gma17g01459 168 MobiDBLite consensus disorder prediction 24 81 - -
Gma17g01459 168 SUPERFAMILY Leucine zipper domain 61 112 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01459 Gma-Chr17 13897772 13898598 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01459 13 144 bZIP Transcription Factor Family AT3G49760 42.857 8.59e-29 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gma17g01459 bZIP_1 2.2e-06 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01459 - - gmx:100809244 318.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01459 17 13897772 13898598 Gma05g01091 05 31154504 31155046 GST
Gma01g01988 01 55299320 55300059 Gma17g01459 17 13897772 13898598 PCT
Gma11g00418 11 3482861 3483610 Gma17g01459 17 13897772 13898598 PCT
Gma17g01459 17 13897772 13898598 Gma01g01988 01 55299320 55300059 PCT
Gma17g01459 17 13897772 13898598 Gma11g00418 11 3482861 3483610 PCT