Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01457 ATGAAGCTGAAGAATGATGCCTGGTTTGGTTCTCAAAAAACATTTTCCACCACTCACACCTTGCTGAGCCACATCGAGAATCTGATCACCGGCCTCACCAAGGGATATCGTTACAAGATGAGGTTCGTGTATGCTCACTTTCCAATCAACGCTAGGATTGGCAACAACAAGAAGTATATTGAAATTCGGAATTTCCTTGGTGAGGAAAGTGGATATGTTGAGGGCATTTCCATTGTTTGA 240 0.4292 MKLKNDAWFGSQKTFSTTHTLLSHIENLITGLTKGYRYKMRFVYAHFPINARIGNNKKYIEIRNFLGEESGYVEGISIV 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01457 79 PANTHER 60S/50S RIBOSOMAL PROTEIN L6/L9 2 70 IPR000702 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Gma17g01457 79 Gene3D - 36 78 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Gma17g01457 79 SUPERFAMILY Ribosomal protein L6 36 71 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Gma17g01457 79 PANTHER 60S RIBOSOMAL PROTEIN L9-LIKE 2 70 - -
Gma17g01457 79 Gene3D - 1 35 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01457 Gma-Chr17 13871129 13871492 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01457 2 79 Cytoplasmic Ribosomal Protein Gene Family AT1G33140 59.756 9.38e-32 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01457 K02940 - gmx:100811498 117.472