Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01451 ATGAAGAGTATGGAAAATGATGACACTGTTGACCTTAATAATCAAAACAACAACTGGTTGGGTTTCTCACTCTCTCCTCAAATGAATAATAATAATATAGGAGTTTCTACACACACACAACCTTCCTCTGCTGCCGCTGAAGTGGTTCCTACAAGCTTCTACCACACTACTCCACTTAGTAGCTATGGTTTCTACTATGGACTTGAAGCGGAAAATGTTGGATTGTATTCAGCTTTGCCTATCATGCCCCTCAAATCTGATGGCTCTCTCTATGGAATGGAAGCTGTGAGCAGGTCACAAGCACAAGCAATGGCTACTACTTCAACACCAAAACTGGAGAACTTCTTAGGTGGGGAAGCAATGGGGACCCCTCATCATCACTATGAATGTAGTGCCACAGAAACAATGCCTCTGAGCTTAGACAGTGTTTTTTACAACCAACCCTCACGCCGTGACCAAAATAATAACCAAACTTACCAAAACCATGTCCAACACATTAGCACTCAACAACAACAGCAACAAGAACTTCAAGCATATTACTCTACCTTGAGAAACCATGATATGATGTTAGAAGGGTCCAAGCAAAGCCAAACTTCAGAAAACAACAACAACAATCTTCAGGTTCAAAACATGGGTGATGATGCTGTTTCTGTTCCTGTTGCTGGCCTTAAGAGTTGGGGAGTGAGGAACTTCCAAGCTAGCCATGCACATGAGTCAAAGATGATTGTTCCTCATCATGTGGAGGAAAATGGTGGTGAATCAGGGTCCATTGGATCAATGGCTTATGGTGACTTGCAATCTTTGAGCTTGTCCATGAGTCCTAGCTCTCAGTCTAGCTGCGTCACAAGTTCACACCGTGCTTCATCTGCTGTCATTGATTCTGCTGCCATGGATACAAAGAAGAGGGGATCTGAAAAAGTTGACCAGAAGCAAATTGTTCATAGGAAGTCCATTGACACCTTTGGACAAAGAACCTCTCAATATAGAGGTGTAACACGGCATAGGTGGACTGGGAGATATGAAGCTCATCTTTGGGACAACAGCTGCAAGAAAGAGGGGCAAAGCAGGAAAGGAAGACAAGGGGGTTATGATATGGAAGAAAAAGCTGCAAGAGCTTATGATCTAGCTGCACTCAAGTATTGGGGACCCTCCACTCACATAAACTTTCCTTTGGAAAATTATCAAAATGAACTTGAGGAAATGAAGAACATGACTAGACAAGAGTATGTTGCTCATTTGAGAAGAAAAAGCAGTGGATTCTCAAGAGGGGCTTCCATGTACAGAGGAGTAACAAGCAGACACCACCAACATGGAAGGTGGCAAGCTCGAATTGGTAGAGTGGCTGGAAACAAAGATCTATATCTTGGAACCTTCAGTACACAAGAGGAAGCAGCTGAAGCCTATGACATTGCTGCTATAAAATTCCGAGGAGCGAATGCTGTAACCAACTTTGACATAACAAGATATGATGTTGAGAAAATCATGGCAAGCAGCAACCTTCTTAGCAGCGAGCTCGCTAGGCGCAACCAAGAGACGACGGACAATGGAACTCAGTACATTGATCAAAATCACAATAAGCCTTCTGCATATGAGGACACTCAAGAAGCTGCAATTCTGATGCATCAGAAGAGCTGTGAGACCCAAAATGATCAGTGGAAGATGGTTCTCTACCAACAATCCTCTCAGCAACTTGAGCAGAATATTCCACCGAGAATTGAGAGTGACAGAACTAACCAGTCCTTCTCAGTGGCTTTGGAAAACATGTTTCATCAAGAAGTAGAGGAATCAAGTAAGGTGAGAACACATGTGTCAAATCCTTCTTCATTGGCCACAAGTTTGAGCAGCTCAAGAGAATGTAGCCCTGATAGGACAAGCTTGCCAATGCTCTCTGGAGTGCCTTCAACTTCATCAAAACTATTGGCTACTAATCCAAATAACGTGAATTCTTGGGACCCTTCACCCCATTTGAGGCCAGCACTTACTTTGCCTCAAATGCCAGTTTTTGCAGCTTGGACAGATGCATAG 2025 0.4336 MKSMENDDTVDLNNQNNNWLGFSLSPQMNNNNIGVSTHTQPSSAAAEVVPTSFYHTTPLSSYGFYYGLEAENVGLYSALPIMPLKSDGSLYGMEAVSRSQAQAMATTSTPKLENFLGGEAMGTPHHHYECSATETMPLSLDSVFYNQPSRRDQNNNQTYQNHVQHISTQQQQQQELQAYYSTLRNHDMMLEGSKQSQTSENNNNNLQVQNMGDDAVSVPVAGLKSWGVRNFQASHAHESKMIVPHHVEENGGESGSIGSMAYGDLQSLSLSMSPSSQSSCVTSSHRASSAVIDSAAMDTKKRGSEKVDQKQIVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQSRKGRQGGYDMEEKAARAYDLAALKYWGPSTHINFPLENYQNELEEMKNMTRQEYVAHLRRKSSGFSRGASMYRGVTSRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGANAVTNFDITRYDVEKIMASSNLLSSELARRNQETTDNGTQYIDQNHNKPSAYEDTQEAAILMHQKSCETQNDQWKMVLYQQSSQQLEQNIPPRIESDRTNQSFSVALENMFHQEVEESSKVRTHVSNPSSLATSLSSSRECSPDRTSLPMLSGVPSTSSKLLATNPNNVNSWDPSPHLRPALTLPQMPVFAAWTDA 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01451 674 Coils Coil 391 411 - -
Gma17g01451 674 ProSiteProfiles AP2/ERF domain profile. 426 485 IPR001471 GO:0003700|GO:0006355
Gma17g01451 674 CDD AP2 425 487 IPR001471 GO:0003700|GO:0006355
Gma17g01451 674 CDD AP2 326 390 IPR001471 GO:0003700|GO:0006355
Gma17g01451 674 Pfam AP2 domain 327 382 IPR001471 GO:0003700|GO:0006355
Gma17g01451 674 Pfam AP2 domain 427 477 IPR001471 GO:0003700|GO:0006355
Gma17g01451 674 MobiDBLite consensus disorder prediction 595 642 - -
Gma17g01451 674 PRINTS Ethylene responsive element binding protein signature 467 487 IPR001471 GO:0003700|GO:0006355
Gma17g01451 674 PRINTS Ethylene responsive element binding protein signature 328 339 IPR001471 GO:0003700|GO:0006355
Gma17g01451 674 SUPERFAMILY DNA-binding domain 326 392 IPR016177 GO:0003677
Gma17g01451 674 SUPERFAMILY DNA-binding domain 425 486 IPR016177 GO:0003677
Gma17g01451 674 Gene3D AP2/ERF domain 426 487 IPR036955 GO:0003700|GO:0006355
Gma17g01451 674 Gene3D AP2/ERF domain 326 392 IPR036955 GO:0003700|GO:0006355
Gma17g01451 674 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 15 672 - -
Gma17g01451 674 MobiDBLite consensus disorder prediction 600 642 - -
Gma17g01451 674 ProSiteProfiles AP2/ERF domain profile. 327 390 IPR001471 GO:0003700|GO:0006355
Gma17g01451 674 SMART rav1_2 327 396 IPR001471 GO:0003700|GO:0006355
Gma17g01451 674 SMART rav1_2 426 491 IPR001471 GO:0003700|GO:0006355
Gma17g01451 674 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT 15 672 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01451 Gma-Chr17 13820814 13824739 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01451 407 674 AP2-EREBP Transcription Factor Family AT4G37750 26.452 5.40e-14 73.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Gma17g01451 AP2 4.5e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01451 K09285 - gmx:100792451 1269.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01451 17 13820814 13824739 Gma05g01095 05 31224989 31229198 GST
Gma01g01989 01 55309208 55312633 Gma17g01451 17 13820814 13824739 PCT
Gma11g00417 11 3463220 3466913 Gma17g01451 17 13820814 13824739 PCT
Gma17g01451 17 13820814 13824739 Gma01g01989 01 55309208 55312633 PCT
Gma17g01451 17 13820814 13824739 Gma11g00417 11 3463220 3466913 PCT