Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01433 ATGCGAGTCCTTGTCTTGCTCATGCTCTTCCTCCACTCCCTCCACGCAGCGCGAATCTCAGAATACCGCGCGCTTCTCTCTTTCAAAGCATCTTCCATAACCAACGACCCCACCCATGCTCTCTCCTCCTGGAACTCCTCCACCCCCTTCTGCTCCTGGTTCGGCGTCACGTGCGACTCTCGCCGCCACGTGACCGGCCTCAACCTAACTTCCTTATCTCTCTCCGCCACTCTCTATGAccacctctcccacctccccttcctctcccacctctccctCGCCGATAACCAGTTCTCCGGCCCCATCCCGGTTTCCTTCTCCGCCCTCTCCGCCCTCCGCTTCCTCAACCTCTCCAACAATGTTTTTAACCAAACTTTTCCTTCTCAGCTTGCGCGCCTCTCCAACTTGGAGGTTCTCGACCTCTACAACAACAATATGACTGGCCCTTTACCTCTCGCCGTCGCCTCCATGCCGCTCCTCCGCCACCTCCACCTCGGCGGCAACTTCTTCTCCGGCCAGATCCCTCCCGAGTACGGCACCTGGCAACACCTCCGCTACCTCGCCCTCTCCGGCAACGAGCTCGCCGGCTACATCGCCCCGGAGCTCGGTAACCTCTCCGCCCTCCGCGAGCTCTACATTGGCTACTACAACACCTACTCCGGCGGCATCCCTCCCGAGATTGGAAACCTCTCCAACCTCGTACGCCTCGACGCCGCCTACTGTGGCCTCTCCGGCGAGATTCCGGCTGAGCTAGGAAAGCTTCAGAATTTAGACACGCTGTTTCTTCAGGTGAATTCGCTCTCCGGTTCTCTCACTTCCGAGCTGGGGAACTTGAAAAGCCTCAAGTCAATGGACCTTTCCAACAACATGCTCTCCGGAGAGGTTCCGGCGAGTTTTGCGGAGCTGAAGAATCTCACTCTGTTGAACCTGTTCCGGAACAAGCTCCACGGCGCGATTCCCGAGTTTGTTGGAGAGTTACCGGCTTTGGAGGTGTTGCAGCTTTGGGAGAACAACTTCACCGGAAGCATTCCTCAGAGTTTGGGGAAAAATGGAAGACTCACTCTCGTTGATCTTTCTTCGAACAAAATAACGGGGACGCTACCTCCATATATGTGTTATGGGAATCGTCTTCAGACTCTGATAACTCTCGGGAACTATTTGTTCGGTCCCATTCCTGATTCGCTTGGGAAGTGCGAGTCTCTGAATAGGATTCGGATGGGAGAGAACTTTCTGAACGGTTCTATTCCGAAGGGTCTATTTGGGCTTCCGAAGCTTACGCAGGTCGAGCTTCAGGATAATCTTCTCACGGGACAGTTTCCCGAGTATGGTTCCATTGCCACTGATCTTGGCCAGATTAGCCTCTCTAATAACAAGCTCTCTGGGCCGTTGCCATCCACCATTGGGAACTTCACTAGCATGCAGAAGCTTCTTCTTGATGGTAACGAGTTTTCAGGTCGAATTCCTCCTCAGATTGGTAGGCTGCAACAGCTTTCGAAGATTGATTTTAGTCATAACAAGTTCTCGGGTCCCATTGCTCCTGAGATAAGTAGGTGCAAGCTTTTGACCTTCATTGATCTCAGTGGTAATGAGCTCTCTGGTGAGATTCCAAACCAGATTACTTCCATGCGGATATTGAATTATCTCAACCTTTCAAGAAACCATCTAGATGGGTCTATTCCAGGTTCCATTGCCTCTATGCAGAGTTTGACTTCTGTTGATTTTTCATACAACAATTTCTCTGGGTTGGTTCCTGGCACTGGCCAATTCGGCTACTTTAACTACACCTCTTTCTTAGGGAACCCTGAACTCTGTGGCCCATATTTGGGTCCTTGTAAAGATGGGGTTGCCAATGGCCCTCGCCAACCCCATGTTAAAGGTCCACTATCTTCTTCATTGAAGCTTTTGCTAGTTATTGGGTTGCTTGTGTGTTCCATTTTATTTGCTGTTGCGGCAATAATCAAAGCCCGGGCTTTGAAGAAGGCCAGTGAAGCTCGGGCATGGAAATTAACCGCGTTCCAGCGCTTGGACTTCACTGTTGATGATGTTTTGGATTGCTTGAAGGAGGACAACATAATAGGGAAAGGGGGTGCTGGCATTGTATACAAAGGGGCAATGCCTAACGGGGATAATGTTGCTGTGAAAAGGTTACCAGCTATGAGCAGAGGATCTTCCCATGATCATGGTTTCAATGCTGAGATTCAGACATTGGGGAGGATTCGACACAGACACATTGTTAGACTGTTGGGTTTCTGTTCAAATCATGAGACAAATCTCTTGGTGTATGAGTACATGCCAAATGGAAGTTTAGGTGAGGTTCTTCATGGCAAGAAAGGGGGCCACTTGCATTGGTACACAAGGTATAAGATTGCTGTGGAGGCTTCAAAGGGCCTTTGCTATCTACACCATGACTGTTCACCACTCATTGTCCATAGAGATGTTAAATCCAACAACATCCTTCTTGATTCCAATTTTGAAGCACATGTTGCTGATTTTGGGCTCGCTAAATTCCTGCAAGATTCTGGAGCATCTGAATGCATGTCTGCTATTGCTGGTTCTTACGGATACATAGCTCCAGAGTATGCCTACACTTTGAAAGTTGATGAGAAAAGCGACGTGTACAGCTTTGGAGTGGTTCTTTTGGAGCTTGTAACAGGCAGGAAACCGGTTGGCGAGTTTGGCGATGGTGTGGACATTGTACAATGGGTGAGAAAAATGACAGACTCAAACAAGGAAGGAGTTCTAAAAGTTCTTGATCCTAGACTTCCCTCGGTTCCACTTCATGAGGTGATGCATGTTTTCTATGTAGCCATGCTGTGTGTTGAGGAACAGGCGGTGGAGAGGCCAACTATGCGCGAAGTTGTTCAAATTCTGACCGAGCTTCCAAAACCACCAAGCTCCAAACAAGGAGACTTAACAATCACAGAATCCTCTTTGTCTTCATCAAACAGTTTAGAGTCTCCAACCACGGCATCAAAGGAACCCAAAGATCAACATCCTCCTCAGTCGCCACCAACCGATCTACTTAGCATTTGA 3033 0.4866 MRVLVLLMLFLHSLHAARISEYRALLSFKASSITNDPTHALSSWNSSTPFCSWFGVTCDSRRHVTGLNLTSLSLSATLYDHLSHLPFLSHLSLADNQFSGPIPVSFSALSALRFLNLSNNVFNQTFPSQLARLSNLEVLDLYNNNMTGPLPLAVASMPLLRHLHLGGNFFSGQIPPEYGTWQHLRYLALSGNELAGYIAPELGNLSALRELYIGYYNTYSGGIPPEIGNLSNLVRLDAAYCGLSGEIPAELGKLQNLDTLFLQVNSLSGSLTSELGNLKSLKSMDLSNNMLSGEVPASFAELKNLTLLNLFRNKLHGAIPEFVGELPALEVLQLWENNFTGSIPQSLGKNGRLTLVDLSSNKITGTLPPYMCYGNRLQTLITLGNYLFGPIPDSLGKCESLNRIRMGENFLNGSIPKGLFGLPKLTQVELQDNLLTGQFPEYGSIATDLGQISLSNNKLSGPLPSTIGNFTSMQKLLLDGNEFSGRIPPQIGRLQQLSKIDFSHNKFSGPIAPEISRCKLLTFIDLSGNELSGEIPNQITSMRILNYLNLSRNHLDGSIPGSIASMQSLTSVDFSYNNFSGLVPGTGQFGYFNYTSFLGNPELCGPYLGPCKDGVANGPRQPHVKGPLSSSLKLLLVIGLLVCSILFAVAAIIKARALKKASEARAWKLTAFQRLDFTVDDVLDCLKEDNIIGKGGAGIVYKGAMPNGDNVAVKRLPAMSRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEVLHGKKGGHLHWYTRYKIAVEASKGLCYLHHDCSPLIVHRDVKSNNILLDSNFEAHVADFGLAKFLQDSGASECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELVTGRKPVGEFGDGVDIVQWVRKMTDSNKEGVLKVLDPRLPSVPLHEVMHVFYVAMLCVEEQAVERPTMREVVQILTELPKPPSSKQGDLTITESSLSSSNSLESPTTASKEPKDQHPPQSPPTDLLSI 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01433 1010 MobiDBLite consensus disorder prediction 961 1010 - -
Gma17g01433 1010 SUPERFAMILY Protein kinase-like (PK-like) 680 957 IPR011009 -
Gma17g01433 1010 Gene3D Transferase(Phosphotransferase) domain 1 764 976 - -
Gma17g01433 1010 Gene3D Phosphorylase Kinase; domain 1 652 763 - -
Gma17g01433 1010 Gene3D Ribonuclease Inhibitor 15 78 IPR032675 -
Gma17g01433 1010 Gene3D Ribonuclease Inhibitor 79 346 IPR032675 -
Gma17g01433 1010 ProSitePatterns Serine/Threonine protein kinases active-site signature. 808 820 IPR008271 GO:0004672|GO:0006468
Gma17g01433 1010 SUPERFAMILY L domain-like 351 611 - -
Gma17g01433 1010 Pfam Protein tyrosine and serine/threonine kinase 688 957 IPR001245 GO:0004672|GO:0006468
Gma17g01433 1010 Gene3D Ribonuclease Inhibitor 351 615 IPR032675 -
Gma17g01433 1010 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 5 998 - -
Gma17g01433 1010 SUPERFAMILY RNI-like 66 388 - -
Gma17g01433 1010 SMART LRR_typ_2 470 494 IPR003591 -
Gma17g01433 1010 SMART LRR_typ_2 566 589 IPR003591 -
Gma17g01433 1010 SMART LRR_typ_2 109 132 IPR003591 -
Gma17g01433 1010 SMART LRR_typ_2 133 156 IPR003591 -
Gma17g01433 1010 SMART LRR_typ_2 278 301 IPR003591 -
Gma17g01433 1010 SMART LRR_typ_2 326 350 IPR003591 -
Gma17g01433 1010 SMART LRR_typ_2 157 183 IPR003591 -
Gma17g01433 1010 ProSiteProfiles Protein kinase domain profile. 686 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g01433 1010 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 5 998 - -
Gma17g01433 1010 Pfam Leucine rich repeat N-terminal domain 20 59 IPR013210 -
Gma17g01433 1010 SMART serkin_6 686 956 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01433 Gma-Chr17 13543330 13547195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01433 12 987 Receptor kinase-like Gene Family AT5G65700 79.349 0.0 1567
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gma17g01433 PK_Tyr_Ser-Thr 2.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01433 - - gmx:100499646 1969.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01433 17 13543330 13547195 Gma05g01116 05 31698701 31702559 GST
Gma01g02009 01 55491364 55495123 Gma17g01433 17 13543330 13547195 PCT
Gma11g00400 11 3290511 3294043 Gma17g01433 17 13543330 13547195 PCT
Gma17g01433 17 13543330 13547195 Gma01g02009 01 55491364 55495123 PCT
Gma17g01433 17 13543330 13547195 Gma11g00400 11 3290511 3294043 PCT