Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01414 ATGGCTACCGCGTCTGGCATGCCTGAGCAGGAGACACAGGTGTTTTCTGGCAACAATGACCAATATCCTAGGTTGGATGTCTACGTGTGGGACATGGATGAGACTCTTGTATTGCTAAACTCCTTGCTGAAATCATCCTATGCTGAGGCTTTTAACGGTCTGAAGGATGTGCAGAAGGGGGTGGAAATCGGGAGGACGTGGGAAAATCTCATTCTACAAATATGTGATGATTATTTCTTCTATGAACAAATTGAAAATTACAATAAGCCATTTCTTGATGCTCTGGCCCAATATGATGATGGGAGGGACCTATCTGATTATGACTTCAACCAAGATGAATTAGGTTCCCCACATGAGGATGATGCCAACAATAGAAAACTTGCATATAGGCATCGAGTCATTGCCCAAAAATACTTACAGGGTTTACGTAATATTTTAGATCATGAGACAATAAAACTCTGGGATGAATTGTATGATAAAACTGATGAATACACTGACAGGTGGCTTTCATCAGCACGGACGTTTTTGAAGGAGTGTTCGGGTGAAGATAAAGATGCAGTTTCCTCTGTTGCTTTTGCTAACACTAGCTCAAACTCAACTAATTCAAATCATGTAAATGTTTTAGTGACATCTGGATCGATAGTTCCCTCCCTTGTGAAATGCATGCTCTTTCATCTGGACAGCTTAATAACGCATGGAAATGTTTATAGCTCATGGGAAGTGGGGAAAATTCAATGTTTCCGATGGATCAAGGAGCGTTTCAACCATCCCAATGTTCGATTTTGTGCAATTGGAGATGGATGGGAAGAGTGTGAGGCAGCAGAAATCATGAGATGGCCATTTGTTAAGATCGATCCACGGCCAGGAAAACTTCACAGGTTCCCTGGTCTCACATTGACAACAGTTAGCCACTACTTTTCTGTGGTGTATGGAAGGCCGGGCAACGAGAATGATGAAGAATGA 963 0.4216 MATASGMPEQETQVFSGNNDQYPRLDVYVWDMDETLVLLNSLLKSSYAEAFNGLKDVQKGVEIGRTWENLILQICDDYFFYEQIENYNKPFLDALAQYDDGRDLSDYDFNQDELGSPHEDDANNRKLAYRHRVIAQKYLQGLRNILDHETIKLWDELYDKTDEYTDRWLSSARTFLKECSGEDKDAVSSVAFANTSSNSTNSNHVNVLVTSGSIVPSLVKCMLFHLDSLITHGNVYSSWEVGKIQCFRWIKERFNHPNVRFCAIGDGWEECEAAEIMRWPFVKIDPRPGKLHRFPGLTLTTVSHYFSVVYGRPGNENDEE 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01414 320 PANTHER EYES ABSENT 5 311 IPR028472 GO:0004725
Gma17g01414 320 Gene3D - 26 294 IPR038102 -
Gma17g01414 320 PANTHER DEVELOPMENTAL PROTEIN EYES ABSENT 5 311 - -
Gma17g01414 320 SUPERFAMILY HAD-like 29 286 IPR036412 -
Gma17g01414 320 TIGRFAM EYA-cons_domain: EYA conserved domain 26 302 IPR006545 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01414 Gma-Chr17 13279165 13283520 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01414 25 320 Protein tyrosine phosphatase (PTP) family AT2G35320 60.135 2.46e-135 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01414 - K17620 gmx:100799315 643.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01414 17 13279165 13283520 Gma17g01414 17 13279165 13283520 ECH
Gma17g01414 17 13279165 13283520 Gma05g01135 05 32330815 32343321 GST