Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01402 ATGGGTTGCTTACACTCAAAAACCGCACATCTTCACTCCCCTGAAGACTCTCCTACTGCCTTGCCAGACTCCAAAAAACCCGATCCAGGGAATGGTGGTGATGATGTTGATCAAGAGTGTCAGGTTCAAGCATTCAAAGAGTATGGTCTGATTGAGCTTAGAAGGGCCACAAATGAGTTCAGCACAGATTACATTGTTTCTGAGAGTGGTGAGAAAGCTCCCAATGTGGTCTACAGAGGGAAGCTTGAGAACAATCGGTTAGTTGCTGTGAAACGCTTCTCCAAACTGTCTTGGCCTGATGCTCAACAGTTCATGGCAGAGGCAGCTGGAGTTGGGAAAGTGAGGCACAAGAGAATGGTGAATCTAATTGGTTGTTGTGCTGAAGGAGATGAAAGGCTCTTGGTTGCTGAGTACATGCCAAATGATACTTTGTCCAAACATCTCTTTCACTGGGACAAGCAACCATTACCATGGGAAATGCGTGTCAGAGTTGCATACCATGTTGCCCAGGCACTAGATCATTGTAGCTTGGAAAACCATAAAATATATCATGATCTGAATGCATATAGGATTCTTTTTGATGAGGATGGTGATCCCCGCTTATCTAGTTTTGGGCTTATGAAAAATAGTCGAGATGGGAAAAGCTACAGTACTAATTTAGCTTATACTCCACCTGAATTTTTGCGAACAGGCAGGATAATCCCAGAGAGTGTGATCTACAGTTATGGAACTGTTCTTCTGGATCTTTTAAGTGGCAAGCACATTCCTCCAAGCCATGCTTTGGACCTAATCAGAGGGAAAAATGTTTTGTTGTTGATGGACTCTTCTCTAGAAGGGCAATATGCAAACGACGATGCTACAAAGTTGGTTGAGCTTGCTTCAAAATGTCTTCAGTTTGAGGCCAGAGAACGACCTGAAATTAAGTTCCTTCTTACTGCCGTTGCGCCTCTTCAAAGGCAGAAAGAGGTAGCATCTCTTGTGTTAATGGGCCTAACTAAAAACACCGCAGTGGCAGTGCTACCAACCATGCTTTCTCCTCTTGGAAAGGCTTGTGCTAGGATGGATCTTACTGCTGTGCATGATATATTGTTAAAAACAGGTTATAAAGATGAAGAAGGTGCAGAAAATGAGCTTTCATTCCAAGAATGGACACAACAAGTACAAGATATCTTGAACACAAAAAAGTTTGGGGATATTGCATTCAGAGACAAGGATTTCAAAAATGCAATCGAGTATTATTCTAAGTTGGTGGTTATGATGTCTGTTCCTTCTGCTACTGTGTTTGCAAGGAGAGCCTTCTCCTACTTGATGAATGATCAAGCAGAACTTGCATTAAGAGATGCCATGCAAGCACAGGTATGCATACCGGATTGGCCAACTGCATTCTACTTGCAGGCTCTTGCCCTCTCAAAGCTGGGAATGGAAACTGATGCACATGACATGCTTAATGATGGAGCTGCCTTTGAAGCAAAGAGGTTTCTTCTTCGTATTTCTCGTAAATTTCTCTCTCAACCTCCTCAAAGGAAAAAAGAAAAGGCATATAGTTATATGGATAACAAATCACCGAGCAAGGAGTCCAAGGAGGTGACACGAGAGTCGCTTATTGCTATTTCTAACTCTTTACCTGATAAGACTCTGGAATCAACTTCTGCCTTAGAGAGCAAGAAATCAGACGGGGTTATGATACCAAACCGTGATCAAGATGACAAGTTTAGGTCTGAACTGATTTCAATTTCTTATGCTGAATCCCCTGATGACAAAATCTGA 1767 0.4244 MGCLHSKTAHLHSPEDSPTALPDSKKPDPGNGGDDVDQECQVQAFKEYGLIELRRATNEFSTDYIVSESGEKAPNVVYRGKLENNRLVAVKRFSKLSWPDAQQFMAEAAGVGKVRHKRMVNLIGCCAEGDERLLVAEYMPNDTLSKHLFHWDKQPLPWEMRVRVAYHVAQALDHCSLENHKIYHDLNAYRILFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLRTGRIIPESVIYSYGTVLLDLLSGKHIPPSHALDLIRGKNVLLLMDSSLEGQYANDDATKLVELASKCLQFEARERPEIKFLLTAVAPLQRQKEVASLVLMGLTKNTAVAVLPTMLSPLGKACARMDLTAVHDILLKTGYKDEEGAENELSFQEWTQQVQDILNTKKFGDIAFRDKDFKNAIEYYSKLVVMMSVPSATVFARRAFSYLMNDQAELALRDAMQAQVCIPDWPTAFYLQALALSKLGMETDAHDMLNDGAAFEAKRFLLRISRKFLSQPPQRKKEKAYSYMDNKSPSKESKEVTRESLIAISNSLPDKTLESTSALESKKSDGVMIPNRDQDDKFRSELISISYAESPDDKI 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01402 588 SUPERFAMILY TPR-like 389 488 IPR011990 GO:0005515
Gma17g01402 588 Gene3D Phosphorylase Kinase; domain 1 34 138 - -
Gma17g01402 588 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK2 1 492 - -
Gma17g01402 588 MobiDBLite consensus disorder prediction 1 37 - -
Gma17g01402 588 ProSiteProfiles Protein kinase domain profile. 63 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g01402 588 MobiDBLite consensus disorder prediction 506 531 - -
Gma17g01402 588 Gene3D Tetratricopeptide repeat domain 384 529 IPR011990 GO:0005515
Gma17g01402 588 SUPERFAMILY Protein kinase-like (PK-like) 52 313 IPR011009 -
Gma17g01402 588 Gene3D Transferase(Phosphotransferase) domain 1 140 331 - -
Gma17g01402 588 Pfam Protein tyrosine and serine/threonine kinase 76 311 IPR001245 GO:0004672|GO:0006468
Gma17g01402 588 MobiDBLite consensus disorder prediction 546 568 - -
Gma17g01402 588 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 492 IPR045845 GO:0004672|GO:0009742
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01402 Gma-Chr17 13096510 13111652 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01402 31 317 Glycoside Hydrolase AT3G07070 33.762 2.20e-40 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Gma17g01402 PK_Tyr_Ser-Thr 1.4e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01402 K14500 - gmx:100795258 988.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01402 17 13096510 13111652 Gma17g01402 17 13096510 13111652 ECH