Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01395 ATGGAAGCCGTCCAAGTCATATCCACCACTACAATCAAGGCACCACCGAGTCACAATAACCATGACTCAGTTCAGAAAATCGATTTAACTCCCTGGGATCTTCAGTTCCTCCCAATTGAAACCATTCAGAAAGGCCTTCTTTTTCGCAACAAAAAACACACAGAAAACCAAATCGAGCACCTCCAACACTCCCTTTCATCCACTCTCGCCTTCTTTCCACCCCTCGCAGGTCGTCTTGTCATTCTCCAACACCACGACAACACTGTCTCGTCCCACATTGTATGCAACAACGCAGGAGCACTCTTTGTCCACGCCGTTGCAGACAACACCACTGTCGTTGATATTCTTCAACCCAAATACGTTCCTCCCATTGTTTACTCCTTCTTTCCGCTCAACGGAGTTAAAAACCACGAAGGCACGTCACAGCCAGCGTTGGCAGTGCAAGTGACGGAGCTACTTGACGGCGTCTTCATCGCCTTCACAATCAACCACGTGGTTGCAGACGGCAAGTCATTTTGGCATTTCGTGAATTCCTGGGCTGAAATCTCACGCGGTAACCCTAAAATATCAAAAATCCCTTTTTTCGAACGTTTCTTTCCCGTTGGCATTGACCGCGCCATACGGTTTCCGTTCACAAAGGTGGAAGGAAAAGAAGAAGGAGAACACTCACAAAACCTTGAACCAAAAACTCTCTCTGAGAGGGTCTTCCATTTCACCAAGCGAAAAATCTCGGAACTGAAATCAAAAGCAAACGCAGAGGCCAACACGGACAAAATATCTTCTCTGCAGGCGGTTTTAACTCTACTTTGGCGCACTGTGAGTCGTTGCAAACATATGGGGCCACAAGAAGAGGTTCATTTTGTTCTTCTGATTGGAGCTAGACCAAGGCTTATTCCACCACTCGCAGATGATTATTTCGGAAACGCAGCACTGGTTGGTCGTGCTACCATGAAAGCAGAAGAACTATTACAGAAGGGTGGATTCGGAAAGGGTGCTTCGGAGATAAACAAGGTAGCCTCGCTAACAGTAACTCATTGGCCACTAGCAGCTCCAAGGTTCAACGTTTACGGCAATGATTTTGGGTGGGGAAAGCCCCTGGCAGTAAGAAGTGGCGGCGCAAATAAAAGTAGCGGAAAAATTACTCTGTTTGCTGGCGCTGAAGAAGGTTCTATTGACATTGAAGTGTGCCTTCCTTATGAGATTCTCGAGGCAATTGGAAATGACTCTGAGCTCATGGATGCCATTTCCAACTAG 1254 0.4697 MEAVQVISTTTIKAPPSHNNHDSVQKIDLTPWDLQFLPIETIQKGLLFRNKKHTENQIEHLQHSLSSTLAFFPPLAGRLVILQHHDNTVSSHIVCNNAGALFVHAVADNTTVVDILQPKYVPPIVYSFFPLNGVKNHEGTSQPALAVQVTELLDGVFIAFTINHVVADGKSFWHFVNSWAEISRGNPKISKIPFFERFFPVGIDRAIRFPFTKVEGKEEGEHSQNLEPKTLSERVFHFTKRKISELKSKANAEANTDKISSLQAVLTLLWRTVSRCKHMGPQEEVHFVLLIGARPRLIPPLADDYFGNAALVGRATMKAEELLQKGGFGKGASEINKVASLTVTHWPLAAPRFNVYGNDFGWGKPLAVRSGGANKSSGKITLFAGAEEGSIDIEVCLPYEILEAIGNDSELMDAISN 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01395 417 Gene3D - 212 339 IPR023213 -
Gma17g01395 417 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 3 339 - -
Gma17g01395 417 Gene3D - 340 408 IPR023213 -
Gma17g01395 417 Gene3D - 2 204 IPR023213 -
Gma17g01395 417 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 350 415 - -
Gma17g01395 417 Pfam Transferase family 336 412 - -
Gma17g01395 417 Pfam Transferase family 4 325 - -
Gma17g01395 417 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 3 339 - -
Gma17g01395 417 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 350 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01395 Gma-Chr17 12926477 12927809 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01395 61 400 Monolignol Biosynthesis Gene Families AT5G48930 26.753 2.32e-26 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01395 - - gmx:100500257 764.607