Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01374 ATGAAGTGTTTCTTCTTCAAGGAGAAGTGCAAATCCGCCCCGGAACTGCACAAGAAGAAAACCCCCGCCGTGAACCGCGCCGCAAACTCCACCGGCTCCGTGTCTTCGCCCAAGAGCGTGAAGGACTTGTACAGAGAGAAAGAGCACAGCTTTAGAGTCTTCACTTTGCAGGAACTGAGAGATGCCACCAACGGCTTCAATAGGATGCTCAAGCTTGGAGAAGGGGGTTTCGGGAGTGTCTATAAAGGATCCATTACGCAACCTGATGGACAAGGTGGTGATCCAATTCCAGTTGCAATCAAAAGGCTCAACACTCGTGGCTTCCAGGGTCATAAAGAATGGCTTGCTGAAGTTCAATTTCTCGGCATTGTTAATCACCCAaatttggttaaacttttgggatactgctccgtggatgcagaaagaggaatccaacggttgttagtgtatgagttcatgcccaacaggagcttggaggatcaccttttcaacaaAAACTTACCAACCCTGCCTTGGAAAACAAGATTGGAGATCATGCTTGGTGCTGCTCAAGGACTAGCTTATCTACATGAAGGACTGGAAATTCAGGTGATCTACCGAGATTTTAAATCTTCAAATGTTCTATTAGATGCGGACTTCCACCCAAAGCTCTCAGATTTTGGTCTGGCTAGAGAAGGACCACAAGGTGATCAGACTCATGTATCCACTGCGGTAGTTGGAACACAGGGTTATGCTGCACCGGAGTACATTGAAACGGGTCACCTGAAAGTTCAGAGTGACATGTGGAGTTTTGGTGTTGTATTGTATGAGATCCTCACAGGAAGAAGGTCATTGGAAAGAAACCGTCCCACAGCAGAACAAAAGCTTCTAGATTGGGTCAAACAATACCCTGCCGACACCAGCAGATTCGTCATCATAATGGACGCTCGTCTCAGAAACCAGTATTCTCTTCCTGCAGCTCGCAAAATAGCTAAGTTGGCTGATAGCTGCTTGAAGAAGAATCCAGAAGATAGACCCTCCATGAGTCAGATAGTGGAAAGCTTGAAGCAAGCATTGCAATATTCAGACACTACTTCTCAGGACATTGCTGAATCCTCCTCCTCATCTCGTTCTAAATTGGTCCGAAAAAAGTAA 1134 0.418 MKCFFFKEKCKSAPELHKKKTPAVNRAANSTGSVSSPKSVKDLYREKEHSFRVFTLQELRDATNGFNRMLKLGEGGFGSVYKGSITQPDGQGGDPIPVAIKRLNTRGFQGHKEWLAEVQFLGIVNHPNLVKLLGYCSVDAERGIQRLLVYEFMPNRSLEDHLFNKNLPTLPWKTRLEIMLGAAQGLAYLHEGLEIQVIYRDFKSSNVLLDADFHPKLSDFGLAREGPQGDQTHVSTAVVGTQGYAAPEYIETGHLKVQSDMWSFGVVLYEILTGRRSLERNRPTAEQKLLDWVKQYPADTSRFVIIMDARLRNQYSLPAARKIAKLADSCLKKNPEDRPSMSQIVESLKQALQYSDTTSQDIAESSSSSRSKLVRKK 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01374 377 Pfam Protein tyrosine and serine/threonine kinase 70 348 IPR001245 GO:0004672|GO:0006468
Gma17g01374 377 ProSitePatterns Protein kinases ATP-binding region signature. 72 101 IPR017441 GO:0005524
Gma17g01374 377 PANTHER RECEPTOR-LIKE KINASE PLANT 11 356 - -
Gma17g01374 377 MobiDBLite consensus disorder prediction 20 39 - -
Gma17g01374 377 Gene3D Phosphorylase Kinase; domain 1 46 152 - -
Gma17g01374 377 PANTHER OS01G0588500 PROTEIN-RELATED 11 356 - -
Gma17g01374 377 CDD STKc_IRAK 72 350 - -
Gma17g01374 377 MobiDBLite consensus disorder prediction 24 38 - -
Gma17g01374 377 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
Gma17g01374 377 ProSiteProfiles Protein kinase domain profile. 66 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g01374 377 SUPERFAMILY Protein kinase-like (PK-like) 48 348 IPR011009 -
Gma17g01374 377 Gene3D Transferase(Phosphotransferase) domain 1 153 374 - -
Gma17g01374 377 MobiDBLite consensus disorder prediction 357 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01374 Gma-Chr17 12646432 12649496 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01374 3 348 Glycoside Hydrolase AT3G07070 41.504 1.84e-87 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gma17g01374 PK_Tyr_Ser-Thr 2.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01374 - K00924 gmx:100786966 734.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01374 17 12646432 12649496 Gma17g01374 17 12646432 12649496 ECH
Gma17g01374 17 12646432 12649496 Gma05g00638 05 6884688 6887807 GST
Gma01g02061 01 56003376 56006438 Gma17g01374 17 12646432 12649496 PCT
Gma11g00355 11 2836368 2838879 Gma17g01374 17 12646432 12649496 PCT
Gma17g01374 17 12646432 12649496 Gma01g02061 01 56003376 56006438 PCT
Gma17g01374 17 12646432 12649496 Gma11g00355 11 2836368 2838879 PCT