Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01364 ATGGTCAACCTCAACAATGAGGTCAAGCGGCTGAGAGAAGAAGTCAATGTCATCAAAAGATGCTTAAAGGCGTTGAAGGAGGAGGTTGTGGATGAAGTTGATCCCATTGACACTGAAATGAACCTTTCCACTAATCAAATAAACCCAAATTTTGTGGGTCACGAAGGCAACCAAAGAAACTTTGGGGTTAGGGCTAATGCCAATCTTGGTGATGAAGGAGAAAGAAAGAAAGAAGTAGCTTTTTGGAGGGTTGACATGGAAGAACGGTATGAGCCATTGAAGGAGCTTGGTGCTGGGAATTTTGGTGTGGCAAGGTTGGCAAAAGACAAGAAAACTGGAGAGCTTGTTGCGGTCAAATACATAGAGAGGGGCAAAAAGATTGATGAGAATGTTCAGAGGGAGATAATTAACCACCGATCTTTAAGGCATCCAAATATAATCAGGTTTAAAGAGGTGTTACtgacccctacacatttagctatcgtcttggagtatgcttcaggtggtgaactttttgagaggatttgtactgctggtcgatttagcgaagatgagGCAAGATATTTCTTCCAGCAGCTAATATCTGGGGTTAGCTACTGTCATTCAATGGAAATTTGTCATAGAGATCTAAAATTGGAAAACACTCTCTTGGATGGAAATCCATCTCCTCGGCTTAAAATTTGTGACTTTGGTTATTCCAAGTCTGCTCTACTGCACTCTCAACCTAAATCAACAGTTGGAACTCCTGCATACATTGCTCCGGAGGTTCTGTCGCGAAAGGAGTATGATGGAAAGATTTCAGATGTTTGGTCCTGTGGAGTGACTCTTTATGTCATGTTAGTTGGTGCATACCCATTTGAAGATCCAGAAGATCCTAGAAATTTCAGAAAGACTATTGGGAGAATAATCGGTATTCAGTACTCCATACCCGACTATGTTCGTGTTTCTCCTGACTGTAGGAATCTTCTCTCTCGCATCTTTGTTGCTGATCCTGCCAAGAGGATCACCATCCCAGAGATAAAACAGTATCCTTGGTTTCTGAAGAATATGCCTAAAGAGATCATCGAAGCTGAAAGAAAAGGATTCGAGGAAACAACCAAAGACCAACCAAACCAGAAGGTGGAGGAAATCATGAGGATAATTCAAGCGGCAAGGATACCAGGACAAGGATCCAAAGCTGGAGAAGGTGGACAAGCTGGCACTGGATCATTAGATATTGAGGATGATGAGGAAATTGATGTTAGTGGTGACTATGAACAAGTGTGA 1266 0.3886 MVNLNNEVKRLREEVNVIKRCLKALKEEVVDEVDPIDTEMNLSTNQINPNFVGHEGNQRNFGVRANANLGDEGERKKEVAFWRVDMEERYEPLKELGAGNFGVARLAKDKKTGELVAVKYIERGKKIDENVQREIINHRSLRHPNIIRFKEVLLTPTHLAIVLEYASGGELFERICTAGRFSEDEARYFFQQLISGVSYCHSMEICHRDLKLENTLLDGNPSPRLKICDFGYSKSALLHSQPKSTVGTPAYIAPEVLSRKEYDGKISDVWSCGVTLYVMLVGAYPFEDPEDPRNFRKTIGRIIGIQYSIPDYVRVSPDCRNLLSRIFVADPAKRITIPEIKQYPWFLKNMPKEIIEAERKGFEETTKDQPNQKVEEIMRIIQAARIPGQGSKAGEGGQAGTGSLDIEDDEEIDVSGDYEQV 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01364 421 MobiDBLite consensus disorder prediction 385 421 - -
Gma17g01364 421 SUPERFAMILY Protein kinase-like (PK-like) 88 353 IPR011009 -
Gma17g01364 421 SMART serkin_6 90 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g01364 421 MobiDBLite consensus disorder prediction 404 421 - -
Gma17g01364 421 PANTHER SERINE/THREONINE KINASE 88 414 - -
Gma17g01364 421 Pfam Protein kinase domain 90 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g01364 421 ProSitePatterns Protein kinases ATP-binding region signature. 96 119 IPR017441 GO:0005524
Gma17g01364 421 Coils Coil 1 28 - -
Gma17g01364 421 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Gma17g01364 421 Gene3D Phosphorylase Kinase; domain 1 73 165 - -
Gma17g01364 421 CDD STKc_SnRK2 89 345 - -
Gma17g01364 421 PANTHER SUCROSE NONFERMENTING 1(SNF1)-RELATED KINASE 88 414 - -
Gma17g01364 421 Gene3D Transferase(Phosphotransferase) domain 1 166 353 - -
Gma17g01364 421 ProSiteProfiles Protein kinase domain profile. 90 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01364 Gma-Chr17 12537935 12545869 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01364 89 350 CBL-interacting serine-threonine protein kinases AT5G25110 44.689 1.03e-69 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Gma17g01364 Pkinase 1.8e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01364 K14498 - gmx:100782714 677.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01364 17 12537935 12545869 Gma05g00624 05 6713410 6717680 GST
Gma01g02065 01 56043329 56047137 Gma17g01364 17 12537935 12545869 PCT
Gma11g00350 11 2804109 2807829 Gma17g01364 17 12537935 12545869 PCT
Gma17g01364 17 12537935 12545869 Gma01g02065 01 56043329 56047137 PCT
Gma17g01364 17 12537935 12545869 Gma11g00350 11 2804109 2807829 PCT