Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01329 ATGACGCGGCGTTGCTCGCATTGCAGCCACAATGGGCACAACTCAAGAACTTGCCCTAACCGCGGGGTGAAGCTCTTCGGGGTCCGATTAACCGATGGGTCGATCCGGAAGAGTGCTAGCATGGGCAATCTAACCCACTATGCCGGTTCCGGGTCGGGTCCACTCCATACCGGGTTGAATAACCCCGGTTCGCCCGGGGAAACCCCCGATCATGCCGCCGCAGTCGCCGACGGTTACTTGTCCGAGGACTTCGTTCCCGGGTCTTCTTCTAGCTCCCGTGAAAGAAAGAAGGGTGTTCCATGGACTGAGGAGGAACATAGAATGTTTTTACTCGGATTGCAGAAGCTGGGCAAAGGTGATTGGCGTGGAATTGCAAGGACCTATGTTATATCAAGGACACCTACTCAAGTGGCTAGCCATGCTCAGAAATATTTCATCAGGCAGAGCAATGTGTCCAGGCGGAAAAGACGGTCCAGCTTGTTTGATATTGTTGCAGATGAAGCAGCTGACACTGCAATGGTACAGCAAGACTTCTTGTCTGCTAATCAGTTACCCACTGAAACAGAAGGCAATAACCCCTTGCCAGCTCCTCCTCCCCTCGACGAAGAGTGCGAATCCATGGATTCCACAAACTCAAATGATGGAGAGCCTGCCCCATCAAAGCCAGAAAACACACAGTCATCTTATCCAATGTTATATCCTGCATATTATTCTCCGGTGTTCCCGTTTCCTCTGCCCTATTGGTCAGGATACAGTCCAGAGTCCACCAAGAAGGAGGAGACACATGAAGTACTGAAGCCAACTGCAGTTCATTCTAAAAGCCCTATCAATGTTGATGAACTGGTTGGCATTTCAAAATTGAGTTTAGGGGAGTCTATTGGTGACTCTGGTCCCTCCTCTCTGTCTCGAAAACTTATCGAAGAAGGACCCTCTAGACAGTCAGCTTTTCATGCAACACCGACATGTGGCAGTTCAAATGGCAGTGCCATCCATGCAGTTTAA 1002 0.501 MTRRCSHCSHNGHNSRTCPNRGVKLFGVRLTDGSIRKSASMGNLTHYAGSGSGPLHTGLNNPGSPGETPDHAAAVADGYLSEDFVPGSSSSSRERKKGVPWTEEEHRMFLLGLQKLGKGDWRGIARTYVISRTPTQVASHAQKYFIRQSNVSRRKRRSSLFDIVADEAADTAMVQQDFLSANQLPTETEGNNPLPAPPPLDEECESMDSTNSNDGEPAPSKPENTQSSYPMLYPAYYSPVFPFPLPYWSGYSPESTKKEETHEVLKPTAVHSKSPINVDELVGISKLSLGESIGDSGPSSLSRKLIEEGPSRQSAFHATPTCGSSNGSAIHAV 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01329 333 MobiDBLite consensus disorder prediction 314 328 - -
Gma17g01329 333 CDD SANT 100 145 IPR001005 -
Gma17g01329 333 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 96 148 IPR006447 GO:0003677
Gma17g01329 333 MobiDBLite consensus disorder prediction 184 226 - -
Gma17g01329 333 MobiDBLite consensus disorder prediction 210 226 - -
Gma17g01329 333 Gene3D - 99 151 - -
Gma17g01329 333 PANTHER TRANSCRIPTION FACTOR KUA1 1 325 - -
Gma17g01329 333 ProSiteProfiles Myb-like domain profile. 93 145 IPR001005 -
Gma17g01329 333 SMART sant 97 147 IPR001005 -
Gma17g01329 333 Pfam Myb-like DNA-binding domain 100 145 IPR001005 -
Gma17g01329 333 PANTHER BNAC01G21010D PROTEIN 1 325 - -
Gma17g01329 333 MobiDBLite consensus disorder prediction 292 333 - -
Gma17g01329 333 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 93 149 IPR017930 -
Gma17g01329 333 MobiDBLite consensus disorder prediction 1 21 - -
Gma17g01329 333 SUPERFAMILY Homeodomain-like 95 150 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01329 Gma-Chr17 11987537 11990953 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gma17g01329 Myb_DNA-binding 2e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01329 - - gmx:780535 672.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01329 17 11987537 11990953 Gma05g00587 05 5906099 5911332 GST