Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01326 ATGGTCATGGAAGAATCTAACCCTTTAGACAATGAAGTTCAACCAACCACTTCATCATCCTCTTTCACCATTACTACTCCCTCTACCTCCTCTTCCTCCTCCATAGAAGAAGCCACTAACACTACTACTAAGGAGAAAAAGAAGAAGAGAGCCATTAGTAATATTGAAGGGAAGCACCCTACGTATAGAGGAGTACGTATGCGTCAATGGGGCAAATGGGTATCCGAAATTAGAGAGCCAAGGAAGAAATCAAGAATTTGGCTTGGAACTTTTCCCACTCCCGATATGGCGGCTCGAGCCCATGATGTGGCGGCTCTCACGATCAAAGGCAGCTCGGCTTACCTCAATTTCCCCGAATTAGCCGCCAAGCTGCCCCGCCCCGCCAGCACCTCCCCCAAGGACATCCAAGCTGCGGCGGCTAAAGCCTCCGCCTTGGATTTCGGTCACCAAAGCCATGAAGCCGAATCCGAGCTGAGCCAAGCCGTTTCCTCCTCAATCCAAACACAATCATCATCATCATCATCCAATTCATCGTTGAAGGGTGTGGATGACACATTCTTGGACCTTCCTGATCTCTCTCTTGACTTGAGCCATGGAGCCGATGAGTTTCATTATTCATCGGCTTGGCTTGTAGCCGGAGCCGAACATATAGAGCTGGGTTTCCGGCTTGAGGAACCTTTTCTTTGGGAATCATATTAA 699 0.4893 MVMEESNPLDNEVQPTTSSSSFTITTPSTSSSSSIEEATNTTTKEKKKKRAISNIEGKHPTYRGVRMRQWGKWVSEIREPRKKSRIWLGTFPTPDMAARAHDVAALTIKGSSAYLNFPELAAKLPRPASTSPKDIQAAAAKASALDFGHQSHEAESELSQAVSSSIQTQSSSSSSNSSLKGVDDTFLDLPDLSLDLSHGADEFHYSSAWLVAGAEHIELGFRLEEPFLWESY 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01326 232 Gene3D AP2/ERF domain 61 119 IPR036955 GO:0003700|GO:0006355
Gma17g01326 232 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF039-LIKE 11 230 - -
Gma17g01326 232 MobiDBLite consensus disorder prediction 40 56 - -
Gma17g01326 232 CDD AP2 62 120 IPR001471 GO:0003700|GO:0006355
Gma17g01326 232 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 11 230 - -
Gma17g01326 232 Pfam AP2 domain 60 110 IPR001471 GO:0003700|GO:0006355
Gma17g01326 232 SUPERFAMILY DNA-binding domain 61 119 IPR016177 GO:0003677
Gma17g01326 232 PRINTS Ethylene responsive element binding protein signature 62 73 IPR001471 GO:0003700|GO:0006355
Gma17g01326 232 PRINTS Ethylene responsive element binding protein signature 84 100 IPR001471 GO:0003700|GO:0006355
Gma17g01326 232 MobiDBLite consensus disorder prediction 156 180 - -
Gma17g01326 232 ProSiteProfiles AP2/ERF domain profile. 61 118 IPR001471 GO:0003700|GO:0006355
Gma17g01326 232 MobiDBLite consensus disorder prediction 1 56 - -
Gma17g01326 232 MobiDBLite consensus disorder prediction 9 39 - -
Gma17g01326 232 SMART rav1_2 61 124 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01326 Gma-Chr17 11960830 11961977 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01326 49 228 AP2-EREBP Transcription Factor Family AT2G44940 48.804 3.96e-58 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma17g01326 AP2 9.1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01326 - - gmx:100812293 362.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01326 17 11960830 11961977 Gma17g01326 17 11960830 11961977 ECH
Gma17g01326 17 11960830 11961977 Gma05g00585 05 5873277 5873969 GST