Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01312 ATGCACAATGATCCTATTATCTTCCGGGCAACTCAGCAGAATCGCGCAGCGAACATCAATTTCGTCCATCAGATCATCCATCAAATCCAACATTCGCGCTTCTTCTTCGTTCTCCAAACCACCTTCCTCCTCTTCTCCTCTTCGCCAATCCTTATTGACCAGGATTTCGGCGGAGCTGAGATGCGCGCAGTCGATGTTGCCGCTGCACAGCGCGGTGGCGGCGGCGAGAATGACGTCGCGCCTGAGCGTGACTTCCAGAAGCTGCCGAGCGCTTTCTCAGGGCACATAGTTAATTGGGAATTTGCGGGACCAGCCAATTTATGGCCTACTGCTTCATTATCAAAGCTTGGTCTATCAGTTCCCAGTTCCTTACTAAGCACACCTGGCTGGTCAAGTGAGGTGAACTCGAAGTCGTTCCAGAAATCCGGACACACCTCATACGCCATACGGCTTGGAATCTTCATCGAACATCATGCTAATATTGTCTTCCGAATGTTCCCAACGACTTTGTGCTCTCTCAGAATCTGCGGGAGCCTCAGGCATCATTTTCCGGGATCCAACTATCCAAGGAGGAGAATTATGACAATGATGAATGGAGGAATGTTGGAAGATATTGCCATAATTGGAGGATTGATAGGGGTGCAATTTGTTCACGCAGGGAATGCTGTGTTGCTTAGTTATCTCATGTCTTTGGGCGTCGAATCTCTTACCCTTGTCATTTTTACTTCCTTTGCTACCTTCCTTATTCTCCTACCCCTTGCCTTCTATTATGAAAGGTGTAAATGGCCAAGGAGAGTTAGTTTCAAGTTGCTTATACAGCTTCTCTCGCTTTCATTAGGAGGGGTAACATTGTTCCAGTCTCTATTCCTCAAAGGAACCAATCTAACCTCTCCAACAATGGGAACAGCCATGCCAAACCTTGCACCAGGTCTTATCTTCATCATCGCATGGATTTTTCGACACAAGATAATCGGTTGTCTCTATCTCTTGGCTGCAATCTTCATATTGTCAAGCAACATTGTCCTACAGGCCTTTACTCTAGGAGATTTTCCTGCACCGATGTCTTTGTGTGCAATAACTTCGTTTTTTGGGACGTTCATGACTGCCGCAGTTCAATTAGTTGAAGATCACGAATTCAAACCAGGTTGGCCAATTGTGAGTGTTGGAGACATGATTGCCTATTCTCTTCTGGCAGGTGCAGTGAGTGGAATATGCTTGAGCGTCAATGGTTGGGCGCTTGAGAAGAGAGGCCCAGTGTTGGTCTCCATGTTCAGCCCTATTGGCACAGTCTGCTCTGTCCTTTTCTCAGTTGTTACTCTAGGGCAAACCATTAATATTGGAAGCTTTGCGGGTATGTTCCTCATGTTCACTGGGTTCTACTTTGTGCTTTGGGCCAAAGGGACAGAAGGCTATGCAAAAGGAGGTGGCTTAGAGAGTGAGTATGATGCAGAGAAGCCTCTATTAAGTTGA 1470 0.4673 MHNDPIIFRATQQNRAANINFVHQIIHQIQHSRFFFVLQTTFLLFSSSPILIDQDFGGAEMRAVDVAAAQRGGGGENDVAPERDFQKLPSAFSGHIVNWEFAGPANLWPTASLSKLGLSVPSSLLSTPGWSSEVNSKSFQKSGHTSYAIRLGIFIEHHANIVFRMFPTTLCSLRICGSLRHHFPGSNYPRRRIMTMMNGGMLEDIAIIGGLIGVQFVHAGNAVLLSYLMSLGVESLTLVIFTSFATFLILLPLAFYYERCKWPRRVSFKLLIQLLSLSLGGVTLFQSLFLKGTNLTSPTMGTAMPNLAPGLIFIIAWIFRHKIIGCLYLLAAIFILSSNIVLQAFTLGDFPAPMSLCAITSFFGTFMTAAVQLVEDHEFKPGWPIVSVGDMIAYSLLAGAVSGICLSVNGWALEKRGPVLVSMFSPIGTVCSVLFSVVTLGQTINIGSFAGMFLMFTGFYFVLWAKGTEGYAKGGGLESEYDAEKPLLS 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01312 489 Pfam EamA-like transporter family 324 463 IPR000620 GO:0016020|GO:0016021
Gma17g01312 489 PANTHER WAT1-RELATED PROTEIN 204 320 IPR030184 GO:0016021|GO:0022857
Gma17g01312 489 PANTHER WAT1-RELATED PROTEIN 320 489 IPR030184 GO:0016021|GO:0022857
Gma17g01312 489 SUPERFAMILY Multidrug resistance efflux transporter EmrE 387 467 - -
Gma17g01312 489 PANTHER OS11G0588100 PROTEIN 320 489 - -
Gma17g01312 489 PANTHER OS11G0588100 PROTEIN 204 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01312 Gma-Chr17 11799960 11812937 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01312 197 473 Nodulin-like Gene Family AT5G47470 48.632 7.01e-103 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01312 - - pop:18094622 379.407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01312 17 11799960 11812937 Gma05g00566 05 5617727 5620970 GST