Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01282 ATGAGAAAGTCAGACAAAAACCCCATGTGTGTGATCTTCAAATTGGTGCGGTGTTTTGGACAAGGAACAAATGGGTATGTACAATTGGGCCATAGCCCAATAGAGCTATTACCAAAGGGTCATTTGGCAGTGTATGTGGGTGAATCTGAAGATGAGAAGCAACGTGTATTGGTACCGGTTACTTACTTTAATCACCCTCTTCTTGGGAAGCTATTGGAGGATGCTGAGAAAGTTTATGGATTTGATCATCCGGGTGTAATAACCATACCATGCAGAGTCTCTGAGTTTGAGAGAGTTCAGAAGATTATTGCCACCACTAGAGGCTACCATAGATGCCTTAGAATTTGTTGCTCCATCAAGTAG 363 0.4242 MRKSDKNPMCVIFKLVRCFGQGTNGYVQLGHSPIELLPKGHLAVYVGESEDEKQRVLVPVTYFNHPLLGKLLEDAEKVYGFDHPGVITIPCRVSEFERVQKIIATTRGYHRCLRICCSIK 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01282 120 Pfam Auxin responsive protein 37 101 IPR003676 GO:0009733
Gma17g01282 120 PANTHER - 8 120 - -
Gma17g01282 120 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 8 120 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01282 Gma-Chr17 11334427 11334789 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01282 37 103 Calmodulin-binding Proteins AT3G43120 49.254 1.54e-15 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01282 K14488 - gmx:102668727 253.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01282 17 11334427 11334789 Gma17g01282 17 11334427 11334789 ECH