Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01265 ATGGAGACCAGTGGCGGTGTTAGCGGCGGCGTTACGCTGGTGGGATCGGATGCTCCGTCGGACTACCATGTAGCTCCGAGGACCGACAACCCGGCTCCGGCAAGCGGATCCACGACGCAGATTCCGGCGACGGCGGGAAGTGTTCCGCCGTCGCCACATCCGCCACACACGGCGGCGATGGAGGCGTATCCGGCGAAGATGCCGGCGAAAAAGAAGAGGGGCCGGCCGAGAAAGTACGCACCGGATGGGTCGGTGACCATGGCGCTGTCTCCGAAGCCGATATCTTCCTCCGCTCCGTTGCCGCCGGTGATCGATTTCTCGTCGGAGAAGCGCGGAAAAATAAAACCAACTAGCTCCGTGAGCAAAGCCAAATTCGAGTTGGAGAATTTAGGTGAATGGGTTGCATGCTCAGTTGGTGCTAATTTTACTCCCCATATCATCACTGTTAATTCTGGGGAGGATGTTACTATGAAGGTAATATCATTTTCTCAGCAAGGGCCGCGAGCTATATGCATTCTTTCAGCTAATGGGGTCATATCAAGTGTCACACTTCGTCAGCCCGATTCTTCTGGGGGCACACTGACATATGAGGGACGGTTTGAAATTCTGTCTTTATCCGGCTCATTCATGCCAAGTGAAAGCGGAGGAACACGAAGCAGATCCGGTGGCATGAGTGTATCTTTGGCAAGCCCTGATGGACGTGTTGTAGGTGGTGGAGTAGCTGGTCTGTTGGTGGCTGCAAGTCCTGTGCAGGTAGTGGTAGGAAGTTTTCTGGCAGGAAACCAGCATGAGCAGAAGCCAAGAAAACAGAGACATGAGGTTATAACAAGTGTGATACCAGCTGCAGTTGTTCCAATCTCTACCCTTGATCCAGTGCCAATTCTATCAGCAGCGTCTTCCATCCGAAACGATAATTGGTCTGCTATGCCAGCAGAGGCCAAGAATAAGCCAGCTGACATTAACGTGTCGCTTCCTGCAGGGTTTGTCTTTATGTAG 996 0.5291 METSGGVSGGVTLVGSDAPSDYHVAPRTDNPAPASGSTTQIPATAGSVPPSPHPPHTAAMEAYPAKMPAKKKRGRPRKYAPDGSVTMALSPKPISSSAPLPPVIDFSSEKRGKIKPTSSVSKAKFELENLGEWVACSVGANFTPHIITVNSGEDVTMKVISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPSESGGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLAGNQHEQKPRKQRHEVITSVIPAAVVPISTLDPVPILSAASSIRNDNWSAMPAEAKNKPADINVSLPAGFVFM 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01265 331 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 9 325 - -
Gma17g01265 331 MobiDBLite consensus disorder prediction 1 94 - -
Gma17g01265 331 Pfam Plants and Prokaryotes Conserved (PCC) domain 144 257 IPR005175 -
Gma17g01265 331 Gene3D - 144 275 - -
Gma17g01265 331 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 9 325 IPR039605 GO:0003680
Gma17g01265 331 MobiDBLite consensus disorder prediction 31 46 - -
Gma17g01265 331 SUPERFAMILY AF0104/ALDC/Ptd012-like 141 260 - -
Gma17g01265 331 CDD DUF296 143 234 IPR005175 -
Gma17g01265 331 ProSiteProfiles PPC domain profile profile. 139 278 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01265 Gma-Chr17 11187061 11192914 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01265 1 324 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 61.017 7.43e-129 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01265 - - gmx:100794202 620.928
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01265 17 11187061 11192914 Gma05g00511 05 4882633 4887925 GST