Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01241 ATGGATGCTTTCCTTTTCATTCTTACATTCTTGTTGAGCTTCCACAAACTTTCTTCTGCCGCAAGCAGTTCAAAAACATATATTATCCATGTGGAGGGGCCACAGGATAAGACACTAGATCAAACAGAAGATTTAGAGAGTTGGTACCATTCATTCATGCCACCTACTACTATGAGCTCTGAGGAACAGCCTCGAATGATTTATTCGTACCGGAACGTGATGAGTGGTTTTGCTGCAAGACTTACTGAAGAAGAGCTGAGAACAATGGAAAAAAAGAACGGCTTTATCTCTGCTCGTCCCGAAAGGATGCTGCATTGCCTAACCACAAATACCCCACAATTTTTGGGGTTGCAGAAACAAACGGGATTATGGAAGGAATCAAACTTTGGAAAGGGAATAATAATTGGGGTGCTGGATTCTGGAATCACGCCTGGTCATCCTTCATTTAGCGATGCAGGAATGCCGCCGCCACCACCTAAATGGAAAGGGAGATGCGAGATTAATGTGACAGCTTGCAACAACAAACTAATTGGAGTAAGGGCTTTCAACCTTGCAGAGAAGTTGGCTAAAGGAGCAGAGGCAGCAATTGATGAGGATGGACATGGAACTCACACAGCAAGCACAGCTGCTGGTGCTTTTGTTGATCATGCAGAATTACTAGGAAATGCCAAAGGAACAGCAGCTGGGATTGCCCCTTACGCTCACCTGGCAATCTACAGAGTATGCTTTGGAAAAGACTGCCATGAGAGTGACATATTGGCAGCAATGGATGCAGCTGTGGAGGATGGCGTGGATGTAATATCAATATCCCTCGGCTCGCATACGCCGAAATCTATTTTCGATGATAGCACTGCAATAGGTGCATTTGCAGCAATGCAGAAGGGAATCTTTGTAAGTTGTGCAGCAGGAAACTCTGGCCCTTTCCATGGCTCCTTAATTAATGGAGCCCCTTGGGTCCTCACAGTTGGAGCAAGCAATATTGACAGAAGCATTGCAGCAACAGCAAAGCTGGGAAATGGGCAAGAATTTGATGGGGAATCTGTTTTCCAGCCTTCCGATTTCTCTCCAACATTATTACCCTTGGCATATGCTGGAAAGAATGGCAAACAAGAAGCTGCATTTTGTGCTAATGGATCCTTGAATGATAGTGATTTCAGAGGCAAGGTTGTTTTGTGTGAGAGAGGAGGAGGTATAGGAAGAATTCCCAAAGGAGAGGAAGTAAAAAGAGTAGGTGGTGCAGCCATGATTCTCGCGAATGATGAAAGCAATGGCTTCAGTCTCTCAGCTGATGTGCATGTTCTACCTGCAACACATGTAAGCTACGATGCTGGACTTAAGATTAAAGCCTATATAAATTCCACTGCAATACCTATAGCAACCATTTTATTCAAGGGGACTATAATTGGAAACTCCTTAGCTCCTGCTGTTACATCCTTCTCTTCAAGAGGTCCCAACTTGCCAAGTCCTGGTATTTTGAAACCAGACATCATAGGACCAGGCGTGAACATCCTAGCTGCCTGGCCATTCCCTCTGAATAACGATACTGATTCAAAATCCACTTTCAACTTTATGTCTGGCACATCAATGTCATGCCCACATCTTAGTGGCATAGCTGCTTTGCTCAAAAGCTCTCATCCTCATTGGTCACCAGCTGCCATAAAATCTGCCATAATGACTTCTGCAGACATAATCAATTTTGAACGCAAACTCATTGTTGATGAAACACTTCACCCTGCAGATGTTTTTGCCACAGGTTCTGGTCATGTGAATCCATCAAGAGCAAATGACCCTGGGTTAGTTTATGATATTCAACCTGATGATTATATACCTTATCTGTGTGGTCTAGGGTACAGCGATACCCAAGTTGGGATCATTGCACACAAAACAATTAAGTGTTCTGAGACTTCAAGCATTCCCGAAGGAGAGCTTAACTATCCTTCATTTTCTGTTGTGCTTGGTTCCCCGCAGACATTCACAAGGACTGTGACAAATGTGGGTGAGGCCAACTCATCTTATGTTGTCATGGTTATGGCACCAGAAGGGGTTGAAGTGAGGGTCCAGCCAAATAAACTTTACTTTTCAGAAGCAAACCAGAAAGACACGTATTCAGTGACATTCAGCCGTATAAAGTCGGGTAATGAAACTGTGAAATATGTTCAAGGGTTTTTACAATGGGTCTCTGCCAAACACATTGTAAGGAGCCCTATCTCGGTCAACTTTGTATAA 2226 0.438 MDAFLFILTFLLSFHKLSSAASSSKTYIIHVEGPQDKTLDQTEDLESWYHSFMPPTTMSSEEQPRMIYSYRNVMSGFAARLTEEELRTMEKKNGFISARPERMLHCLTTNTPQFLGLQKQTGLWKESNFGKGIIIGVLDSGITPGHPSFSDAGMPPPPPKWKGRCEINVTACNNKLIGVRAFNLAEKLAKGAEAAIDEDGHGTHTASTAAGAFVDHAELLGNAKGTAAGIAPYAHLAIYRVCFGKDCHESDILAAMDAAVEDGVDVISISLGSHTPKSIFDDSTAIGAFAAMQKGIFVSCAAGNSGPFHGSLINGAPWVLTVGASNIDRSIAATAKLGNGQEFDGESVFQPSDFSPTLLPLAYAGKNGKQEAAFCANGSLNDSDFRGKVVLCERGGGIGRIPKGEEVKRVGGAAMILANDESNGFSLSADVHVLPATHVSYDAGLKIKAYINSTAIPIATILFKGTIIGNSLAPAVTSFSSRGPNLPSPGILKPDIIGPGVNILAAWPFPLNNDTDSKSTFNFMSGTSMSCPHLSGIAALLKSSHPHWSPAAIKSAIMTSADIINFERKLIVDETLHPADVFATGSGHVNPSRANDPGLVYDIQPDDYIPYLCGLGYSDTQVGIIAHKTIKCSETSSIPEGELNYPSFSVVLGSPQTFTRTVTNVGEANSSYVVMVMAPEGVEVRVQPNKLYFSEANQKDTYSVTFSRIKSGNETVKYVQGFLQWVSAKHIVRSPISVNFV 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01241 741 PRINTS Subtilisin serine protease family (S8) signature 130 149 IPR015500 -
Gma17g01241 741 PRINTS Subtilisin serine protease family (S8) signature 197 210 IPR015500 -
Gma17g01241 741 PRINTS Subtilisin serine protease family (S8) signature 525 541 IPR015500 -
Gma17g01241 741 Gene3D - 612 740 - -
Gma17g01241 741 Pfam Fibronectin type-III domain 642 738 IPR041469 -
Gma17g01241 741 CDD PA_subtilisin_like 334 461 - -
Gma17g01241 741 Pfam Subtilase family 130 561 IPR000209 GO:0006508|GO:0008236
Gma17g01241 741 ProSiteProfiles Serine proteases, subtilase domain profile. 114 595 - -
Gma17g01241 741 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 135 146 IPR023827 -
Gma17g01241 741 Gene3D Peptidase S8/S53 domain 132 608 IPR036852 GO:0004252|GO:0006508
Gma17g01241 741 SUPERFAMILY Subtilisin-like 106 599 IPR036852 GO:0004252|GO:0006508
Gma17g01241 741 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.7 22 738 - -
Gma17g01241 741 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 22 738 IPR045051 -
Gma17g01241 741 Pfam PA domain 361 447 IPR003137 -
Gma17g01241 741 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 13 106 IPR037045 -
Gma17g01241 741 Gene3D - 328 469 - -
Gma17g01241 741 CDD Peptidases_S8_3 104 562 IPR034197 -
Gma17g01241 741 Pfam Peptidase inhibitor I9 26 102 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01241 Gma-Chr17 10949970 10952347 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01241 4 740 Subtilisin-like Serine Gene Family AT1G04110 45.278 0.0 624
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01241 - - gmx:100782009 1455.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01241 17 10949970 10952347 Gma17g01241 17 10949970 10952347 ECH
Gma17g01241 17 10949970 10952347 Gma05g00488 05 4642111 4644770 GST
Gma17g01241 17 10949970 10952347 Gma01g02151 01 56819785 56822233 PCT
Gma17g01241 17 10949970 10952347 Gma11g00255 11 2026461 2028737 PCT