Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01226 ATGGCTTCTACTGGTGGCAAATCTCATTCTCTAATAACTACCTCAAAACGCTCCGTTTTGCTGAAGGACTACCTCAGGGATGACCTGAGTTCATGTTCATCGAACGGTTTCAAATCGCTCACACGCCAACAATGCTGCACCACCGTGGGATTTTTCATGGAGAAAGATCTCCAACTCCAACGCAAAAGAAGGAACACATTCACTCCACGGTCCACTACATCTTCTTCTTCATCAACCATATTGGCTCTGCAGAGAGCTTCTGGAGCCATAATCAACGCGATAAAGTCACTGCCGTTGTCACAAAAGAGTGGTGTCGCTGGTGTTCTTTCTAGAAGCTTTTCGAGGAAGGTGTTGAGTAGAAGGTTCTTCTGGAGAAAAGCGGCGGCGAGGGAAGAGGGAAGCGAAGGTGTGCCGCGGAGGAGGAAATCTTTCCGCGAACTCATTATGCTGGATCATGAGGAGCATCGTAAAGCGACGTCGTCGTTGAATGAGGATACTGATACTACCGTTTTCGCTGCACATGCCCCGAGCGTCACCACCTCTTCGGGTCGCGGCAGTGAAAGCTGGGGAGACAGTGAATTCACTTTTGCGTCTAACGCTGCTTCTTCTTCCTCTGAGAGCTCCAACGAGAATTACCTCGTACTTGAGGATACAAAAGAAGGTGCGCCACATCACAAGCTGGAACAAGTAGTAACCAAGGAATATTGGCCAAATGACGAGAAGGAACAATTTAGCCCTGTATCAATACTAGATTGCCCATTTGAAGATGAAGAAGATAATTACAAGTCTCATATCAATTCCACTTCCATTATTCTTTCCTTTTCTGAAGGAAGGAAACACAAGCACATGCACAAAAGATGCCATTTTGAAAGCGTGGTTCCACTGGAGCCGGTGGTTTTGGAGAAAAAGTTCGCGCGGTTAGAGCTGGAGGATGAACCACACAAGCATTCTACGAAACAATGTTCCACCGTATTAGCTCCAACATTTCGTCGTGACAACAATAACAACATCGAGGAGAATGCTCGCGATCTTCTCAACTTAGTTAAAAGGTCAATTGCACCCAACGTTTTGATAACAAAGGCAGAGAATTTGCTGTTTGATTTCTTCAAGAAGAGTATAGAGGAAAACAAAGACATTGATTACTCAAAGAAGCTTCAACTTTGCAAGGTAGCTGAGGATTGGATACATGGGCAACCCCAAGAACCGTATTTGGGTTGGGAAGTGCAGGGAGGAAAGTGTGTCTACATTAGAGAGATGGATAAGTGTGAGGAGTGGAAAAACTCGTATCAAGAAATACAACAATTGGGTCAGGAGCTGGCAAACGAGGTATTCACTAATTTGGTGAATGAGTTCATATTTGAACTCACGACACGTGCTAGCTAG 1383 0.4519 MASTGGKSHSLITTSKRSVLLKDYLRDDLSSCSSNGFKSLTRQQCCTTVGFFMEKDLQLQRKRRNTFTPRSTTSSSSSTILALQRASGAIINAIKSLPLSQKSGVAGVLSRSFSRKVLSRRFFWRKAAAREEGSEGVPRRRKSFRELIMLDHEEHRKATSSLNEDTDTTVFAAHAPSVTTSSGRGSESWGDSEFTFASNAASSSSESSNENYLVLEDTKEGAPHHKLEQVVTKEYWPNDEKEQFSPVSILDCPFEDEEDNYKSHINSTSIILSFSEGRKHKHMHKRCHFESVVPLEPVVLEKKFARLELEDEPHKHSTKQCSTVLAPTFRRDNNNNIEENARDLLNLVKRSIAPNVLITKAENLLFDFFKKSIEENKDIDYSKKLQLCKVAEDWIHGQPQEPYLGWEVQGGKCVYIREMDKCEEWKNSYQEIQQLGQELANEVFTNLVNEFIFELTTRAS 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01226 460 Coils Coil 422 442 - -
Gma17g01226 460 PANTHER OS04G0572500 PROTEIN 12 455 - -
Gma17g01226 460 PANTHER OS04G0572500 PROTEIN 12 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01226 Gma-Chr17 10796505 10799801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01226 1 456 TRM (TON1 Recruiting Motif) Superfamily AT4G23020 28.088 9.74e-31 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01226 - - gmx:102668195 873.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01226 17 10796505 10799801 Gma17g01226 17 10796505 10799801 ECH
Gma17g01226 17 10796505 10799801 Gma05g00472 05 4491038 4493621 GST