Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01219 ATGAATATCCGTACACCAACCCCCCTTCGCAACGGTCATATTTCACCGACATCTCTCAACGGTCATATAACTCCCTATCTCTGCACCGTTGGATGTGAATCCGACGGTGTAGGAGCAAAGTGTTTCCCTCCCCTTTGGCGAGCATGTTGTCATCATCATATTCCTTTCTTTTCCTCCAAAGGCTGGTTTGTGTTATCTTTTGGGACTACTACTACTACTACTACTTCTGCCACAAACTCCAAGGTTTCGACATTGTTGTCACCAAGGCACAGATTGAGGAGCGAAGCACCAGCACAGTTTCAAGCCTGCCACTTCCAGCTACCTTCTTCCATGAGCACGCAGAGATTGGACCTGCCATCATGCACCACCGCCACCTTCACTCGCAACAACAAAGACCATCATCATCATCAGCCCCTAAGACCAGTGGGCCTCTCCGTGGATCAGAAACACATCGAAGCCAAGACCAGCACCTGTTCTCTCAAGCAACACATTCGACTCCCACCTCTTGCCATCACTGCATCAGCAACACCATTGGTGGAAGAGTCATCCATCATCAACGACAACAACAACAAGAGTTTGAAGAAGAGGCTCGCGGCGGAACACCACGACGATTCCTTCGCCAAGAGGAAAAAGAGTAGCAGTActactgagtgtgattggtttcagcctgatgttgttgagactactactttaggagggtttaacaacaacaacACTTCACTTGTTTCTTTCTCCTCAGAGGAACAAGAGAGGGTTTGTTTTCTTCCTTCTGAAGTGGTGTCTCATTCTGCACCTTTCCCTTTGAACCCCTGGCTGGAATCATGCGTAACAAAGATCACAAATTTCGGCGAGGGTAGCCACCGTCATCCTCATCATCACCACCACCCCCACCACCACAACGACCATGCCTCAGGCTCCGTCTCCAATGCTTCCTCGGAGAGCCAAAGCCTGAGACTAAACGACAACGTTTCAGAACACGAAGTGGGAAACGGTTCAGGGAACCCTTACTACCATCACCGCAAGGTGGAAGCAGGGGAAGAAGACGACCATCACGGGTTCGAGCTCGTGAGCTTGCTCACCGGCTGCGTCGACGCAATTGGATCGAGAAACGTCACTGCAATCAACCATTTCATAGCAAAATTGGGTGATCTTGCTTCCCCCAAAGGAACAACCTCGATAAGCCGCATTTGCGCTTACTTCACAGAAGCATTAGCCATCAGAGTCACGAGGCTCTGGCCTCACGTTTTTCACATCGCCGCCGCCACCACTTCACGCGACATGGTGGAGGACGATGAATCCGCCACAGCATTAAGACTTCTCAACCAAGTAACCCCAATTCCAAAGTTCCTTCATTTCACATCAAACGAGATGCTGCTGAGGGCCTTTGAAGGCAAAGACAGGGTCCACATAATAGATTTCGACATCAAGCAAGGCCTTCAATGGCCCAGCTTGTTCCAAAGCCTAGCTTCGAGGTCCAACCCTCCGATCCACGTCAGGATCACGGGGATCGGAGAGTCCAAACAGGACCTCAACGAAACCGGAGAGAGACTCGCCGGTTTTGCTGAGGTCTTAAACCTCCCCTTCGAGTTCCACCCTGTGGTGGACAGACTCGAGGACGTGAGGCTGTGGATGCTCCACGTGAAGGAGCACGAAACGGTGGCTGTGAACTGCGTTTCGCAGCTTCACAAGACACTCCACGACGGTAGCGGAGGAGCTTTAAGGGACTTCTTGGGTCTAATCCGCAGCACGAAACCCAGCGTCGTCGTCGTGGCGGAACAAGAAGCGGAGCACAACCACACGAGATTGGAGGCGAGGGTGTGCAACTCATTGAAATACTATTCAGCATTGTTTGATTCCATCGAGGAGAGTGGGCTTCCGATAGAGAGTGCGGTGAGGGTGAAAATAGAAGAGATGTACGGTAAGGAGATAAGGAACATTATTGCTTGCGAAGGAAGGGAGAGGGTGGAGAGGCACGAGAGTTTCGGGAATTGGAGGAGGATGATGGTGGAGCAAGGAGGGTTCAGATGCATGAGTGTTACCGAAAGAGAATTGAGCCAGAGCCAGATGCTGTTGAAGATGTATTCTTGCGAGAGTTACAGTGTGAAGAAACAAGAGAAGGAAGGAGCAACAGGAGTTACTCTTAGTTGGTTGGAGCAACCTTTGTACACTGTCTCTGCTTGGGGTCCTGTTGATGCTGCTGCGGAAACTACGGATTGGGTTAATGATATAGCTGTGCTATTTTGGCCTCACTATTA 2255 0.4909 MNIRTPTPLRNGHISPTSLNGHITPYLCTVGCESDGVGAKCFPPLWRACCHHHIPFFSSKGWFVLSFGTTTTTTTSATNSKVSTLLSPRHRLRSEAPAQFQACHFQLPSSMSTQRLDLPSCTTATFTRNNKDHHHHQPLRPVGLSVDQKHIEAKTSTCSLKQHIRLPPLAITASATPLVEESSIINDNNNKSLKKRLAAEHHDDSFAKRKKSSSTTECDWFQPDVVETTTLGGFNNNNTSLVSFSSEEQERVCFLPSEVVSHSAPFPLNPWLESCVTKITNFGEGSHRHPHHHHHPHHHNDHASGSVSNASSESQSLRLNDNVSEHEVGNGSGNPYYHHRKVEAGEEDDHHGFELVSLLTGCVDAIGSRNVTAINHFIAKLGDLASPKGTTSISRICAYFTEALAIRVTRLWPHVFHIAAATTSRDMVEDDESATALRLLNQVTPIPKFLHFTSNEMLLRAFEGKDRVHIIDFDIKQGLQWPSLFQSLASRSNPPIHVRITGIGESKQDLNETGERLAGFAEVLNLPFEFHPVVDRLEDVRLWMLHVKEHETVAVNCVSQLHKTLHDGSGGALRDFLGLIRSTKPSVVVVAEQEAEHNHTRLEARVCNSLKYYSALFDSIEESGLPIESAVRVKIEEMYGKEIRNIIACEGRERVERHESFGNWRRMMVEQGGFRCMSVTERELSQSQMLLKMYSCESYSVKKQEKEGATGVTLSWLEQPLYTVSAWGPVDAAAETTDWVNDIAVLFWPHY 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01219 751 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 81 732 IPR005202 -
Gma17g01219 751 MobiDBLite consensus disorder prediction 283 319 - -
Gma17g01219 751 MobiDBLite consensus disorder prediction 303 319 - -
Gma17g01219 751 Pfam GRAS domain family 355 727 IPR005202 -
Gma17g01219 751 ProSiteProfiles GRAS family profile. 346 728 IPR005202 -
Gma17g01219 751 PANTHER SCARECROW-LIKE PROTEIN 28 81 732 IPR030027 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01219 Gma-Chr17 10710244 10715571 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01219 83 727 GRAS Transcription Factor Family AT1G63100 51.449 0.0 613
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma17g01219 GRAS 3.3e-125 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01219 - - gmx:100777890 1288.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01219 17 10710244 10715571 Gma05g00464 05 4422897 4424891 GST