Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01207 ATGGCGTCTTTGCAGCACCCCACAGCTTCCCTCCAATCCAAACACATCCTAATCCCCCGAAATACCCTCTCCCAGAAACCCATCCTCAACCTCTCCCTCCATGGTACCACCTTCACCCCCCTCAAGCTCAAATTCGGCGTTACCACCACCACCACCGCCGCCGCCGCCACCCGCCGCTCCACCGGCGCCACGGGAGCCAGAATGTCAGCTACCGCAGCCTCCAGCTACGCCGCGGCCCTCGCCGACGTGGCGGCCGCGAACAACACCCTCGACGCGACAACCGCGGACATCGAGAAAATCGACGAAATCTTCTCGGACCCGCAGGTGTCGGACTACTTCGCGGACCCCACCCTGGCCGTGGAGAAGAAGCGCCAGCTGATAGACGAGATTGCGGAATCCTCGGAGTTCCAGCCCCACACGAGAAACTTCCTCTACATCCTCGTGGACGCGCAGAGGATAGACCTCATCAACGAGATAGCAAAAGAGTTCGAACTGGTTTACAATTCCTTGACCGAAACGGAGCTGGCGGTGGTGACGTCGGTGGTGAAGCTGGAGTCGCAGCACCTGGCGCAGATCGCGAAGCAGGTTCAGAAGCTCACTGGGACGAAGAACGTGAGAATTAAGACGCTCCTTGACCCTAGTTTGGTGGCGGGTTTCACTGTCAGGTATTCGGGCTCTAAGTTGATTGACATGAGCGTCAGGAAGCAGCTTGAGGATATTGCTGCTCAGCTTGAGCTGGGTGATATCTCACTCGCCGTATGA 762 0.5827 MASLQHPTASLQSKHILIPRNTLSQKPILNLSLHGTTFTPLKLKFGVTTTTTAAAATRRSTGATGARMSATAASSYAAALADVAAANNTLDATTADIEKIDEIFSDPQVSDYFADPTLAVEKKRQLIDEIAESSEFQPHTRNFLYILVDAQRIDLINEIAKEFELVYNSLTETELAVVTSVVKLESQHLAQIAKQVQKLTGTKNVRIKTLLDPSLVAGFTVRYSGSKLIDMSVRKQLEDIAAQLELGDISLAV 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01207 253 PANTHER ATP SYNTHASE DELTA CHAIN 51 252 IPR000711 GO:0015986|GO:0046933
Gma17g01207 253 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 69 170 IPR026015 -
Gma17g01207 253 Gene3D - 72 164 IPR026015 -
Gma17g01207 253 PANTHER BNACNNG66500D PROTEIN 51 252 - -
Gma17g01207 253 Pfam ATP synthase delta (OSCP) subunit 73 244 IPR000711 GO:0015986|GO:0046933
Gma17g01207 253 PRINTS ATP synthase delta subunit signature 72 91 IPR000711 GO:0015986|GO:0046933
Gma17g01207 253 PRINTS ATP synthase delta subunit signature 141 152 IPR000711 GO:0015986|GO:0046933
Gma17g01207 253 PRINTS ATP synthase delta subunit signature 152 166 IPR000711 GO:0015986|GO:0046933
Gma17g01207 253 PRINTS ATP synthase delta subunit signature 203 218 IPR000711 GO:0015986|GO:0046933
Gma17g01207 253 PRINTS ATP synthase delta subunit signature 219 237 IPR000711 GO:0015986|GO:0046933
Gma17g01207 253 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 205 224 IPR020781 GO:0015986|GO:0016020|GO:0046933
Gma17g01207 253 Hamap ATP synthase subunit delta [atpD]. 68 246 IPR000711 GO:0015986|GO:0046933
Gma17g01207 253 TIGRFAM ATP_synt_delta: ATP synthase F1, delta subunit 73 244 IPR000711 GO:0015986|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01207 Gma-Chr17 10617929 10619107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01207 1 252 Primary Pumps ATPases AT4G09650 60.236 5.98e-97 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01207 K02113 - gmx:100819224 422.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01207 17 10617929 10619107 Gma05g00451 05 4295082 4299242 GST