Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01204 ATGGCCACCACCACCAGTCTTGGCGGCGGCGCAGGCGGAGACGACCGCGTCCTCGCCACAGCTCAGCAGATCGTGAAGAGTCTTAGAGCGGCCAAAGAGGATCGCGAAGACATGCTTATGATCTTCTCTGCCTTCGACAACCGTCTCTCCGGCATCTCCGACCTCATCAACGGCGACGATTCGAAGTCTTCTGATGAGGAAGAACTCGACCGCTTCGAAGCCGCGGAGAAGGTGATTCTCGCTGACGCCTCCCACTCCGGCGAGCCTTCGCGCCAATCCACGTCGCTCTTCAACCCTCCGAACAATCCCGCGGAGTACTTCTCAGCCGTCGACGAAATCATCCACTGGATGGAGCAGTTCTCGATCGCGCCGCCGCCGTCCTCCGCCGCGGGTCGCACCATCCAGGTCATCGCGGACCGCGCCGAGAACGCGATTCAGCTCGCGATGTCGCGGCTCGAGGAGGAGCTTCGGCACGTGCTGATTTGCAACACGATCCCTCTCGACGCCGTGAGCCGCTACGGCTCGATCAGGAGGGTTTCGCTCTCGTTCGGCTCGCATGACGGCGCCGCCGCAATTGACGATTCCCCCCTCCAGAGCTTCGGCGAGGTCGACTCGAGCCGCTTCCACGACCGCGCCGCGAGCCTCGGCGACGACTTGTTCGTCGATTTGGTGCGTCCCGAGGCCGTTCAGGACCTCAGAGAAATCATCGATCGCATGGTTAGGTCTGGTTATGAGAGAGAGTGTCTACAGGTTTATAGCAGCGTCCGTCGTGACGCTTTGGATGAGTGTTTGGTTATTCTCGGTGTTGAGAGGTTGAGTATTGAAGAGGTTCAGAAGGTTGAGTGGAGGAGTTTGGATGAGAAGATGAAGAATTGGGTTCAGGCTGTTAAGGTTGTTGTTGGAGTGCTTCTCAGTGGTGAGAAGAGGCTCTGTGATGGTTTGTTTGGCGATTTGGATGATTTGAAGGAGATTTGTTTCAATGAGACTGCTAAGGGCTGTGTGATGCAGTTGCTGAATTTTGGTGAGGCTATCGCGATTTGTAAGCGCTCGCCCGAGAAGTTGTTTCGGATTTTGGACATGTATGAGGCTTTGAGGGATGCTATGCCTGATTTGCAGGCCATGGTTTCGGATGAGTTTGTGATTGGTGAGGCCAATGGCGTGCTGAGTGGGCTTGGTGAGGCTGCCAAAGGGACTTTTGCTGAGTTTGAGAATTGTATTAGGAATGAGACTTCCAAGAAGCCGGTCATAACCGGGGATGTTCATCCTTTGCCTCGTTATGTTATGAATTATCTCAAGTTGCTTGTTGATTATGGTGACCCTATGGATTCGCTTCTGGAGCTTAGTGAGGAGGATCTCTATCGGTTTAAAAATGATCTTGGTGGTGATGGTTCGCAGTTAGAGGCCATGTCGCCCTTGGGGCAGCGAATTCTGCTGCTCATGTCGGAGCTTGAGTATAATCTTGAGGAGAAGTCGAAGCTTTATGAGGACAGTGCAATGCAGCAGGTGTTTTTGATGAACAATCTTTATTACCTAGTGCGGAAAGTGAAGGACTCGGACCTAGGGAAGGTCTTGGGGGATAATTGGATTAGGAAACGCCGTGGTCAGATACGCCAGTATGCTACAGGGTATCTCAGAGCCTCTTGGAGCAGGGCCTTATCTTGTTTGAAGGATGAAGGGATTGGAGGGAGCTCCAATAATGCATCAAAGATGGCTTTGAAGGAGAGGTTCAAGAGTTTCAATGCTTGTTTTGAAGAAATTTACAGGGTTCAGACAGCTTGGAAGGTACCGGATGACCAGCTTCGGGAGGAGCTGCGGATATCTATATCAGAAAAGGTGATTCCTGCATACCGCTCGTTTGTGGGAAGATTTAGGTGTCAGTTAGAGGGAAGGCATGTTGGGAAGTACATTAAGTATACACCAGAGGATCTAGAGACCTATCTATTAGATTTATTTGAAGGATCCCCTGCTGTATTGCATCACATAAGGAGGAAAAGTACATAG 2001 0.5187 MATTTSLGGGAGGDDRVLATAQQIVKSLRAAKEDREDMLMIFSAFDNRLSGISDLINGDDSKSSDEEELDRFEAAEKVILADASHSGEPSRQSTSLFNPPNNPAEYFSAVDEIIHWMEQFSIAPPPSSAAGRTIQVIADRAENAIQLAMSRLEEELRHVLICNTIPLDAVSRYGSIRRVSLSFGSHDGAAAIDDSPLQSFGEVDSSRFHDRAASLGDDLFVDLVRPEAVQDLREIIDRMVRSGYERECLQVYSSVRRDALDECLVILGVERLSIEEVQKVEWRSLDEKMKNWVQAVKVVVGVLLSGEKRLCDGLFGDLDDLKEICFNETAKGCVMQLLNFGEAIAICKRSPEKLFRILDMYEALRDAMPDLQAMVSDEFVIGEANGVLSGLGEAAKGTFAEFENCIRNETSKKPVITGDVHPLPRYVMNYLKLLVDYGDPMDSLLELSEEDLYRFKNDLGGDGSQLEAMSPLGQRILLLMSELEYNLEEKSKLYEDSAMQQVFLMNNLYYLVRKVKDSDLGKVLGDNWIRKRRGQIRQYATGYLRASWSRALSCLKDEGIGGSSNNASKMALKERFKSFNACFEEIYRVQTAWKVPDDQLREELRISISEKVIPAYRSFVGRFRCQLEGRHVGKYIKYTPEDLETYLLDLFEGSPAVLHHIRRKST 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01204 666 PANTHER EXOCYST COMPLEX PROTEIN EXO70 70 658 IPR004140 GO:0000145|GO:0006887
Gma17g01204 666 SUPERFAMILY Cullin repeat-like 94 652 IPR016159 -
Gma17g01204 666 MobiDBLite consensus disorder prediction 86 101 - -
Gma17g01204 666 Gene3D Exocyst complex component Exo70 91 658 - -
Gma17g01204 666 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 70 658 - -
Gma17g01204 666 Coils Coil 138 158 - -
Gma17g01204 666 Pfam Exo70 exocyst complex subunit 290 648 IPR046364 GO:0000145|GO:0005546|GO:0006887
Gma17g01204 666 MobiDBLite consensus disorder prediction 82 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01204 Gma-Chr17 10587387 10589612 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01204 15 665 EXO70 exocyst subunit family AT5G50380 59.380 0.0 770
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01204 K07195 - gmx:100818693 1260.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01204 17 10587387 10589612 Gma17g01204 17 10587387 10589612 ECH
Gma17g01204 17 10587387 10589612 Gma05g00449 05 4276168 4278816 GST
Gma04g01940 04 49809549 49814099 Gma17g01204 17 10587387 10589612 PCT
Gma06g01466 06 14019250 14024198 Gma17g01204 17 10587387 10589612 PCT