Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01191 ATGGAGGCAGGGCGAAAAAGTGTTTCTCTGAGAAGAGAATTTTGCAAATATGGTTCCACCATCGGGTTTGATCACCATAGCACTCGTTCTTTCGATGTGGAAGTGGGTGGTTCTCGCAACCACCACTTGTCTCGTTCGGGAGTGGAGCGGTTCCATGTTGAAAAAGAGGAAGGTGAGATCTATGTTGAACACGAGCTTGCCTCTGTGGTGCCACCGCCCGAGAAGAAGAGGAAGTTTTCTCCAATTATATGGGACCTAGCAGTGAAGGAAGAAAGAGTCTCTTCAAAGAGTAGGATCTCGCAGATTGCTGCTCTGTCTCCTCCTCGTCCATCTCTACCTAGCAGTCCTGGAGCCTATGTTGTTGATTGTGGGAATGTTATGGAGGAGTTTTTGCCAGATTCACGAAGCTACAAACAAGATGTGGAGGAAGAGAATGATGTGCAAGGTTGGACAATCAAAAAGTCAAGATGGGATTGTGATGATGTTCCGTCACCAAGGGGGGCTGATGAAAAACAGAAGCACGGTAAAGTGAGCTCCAGTCCTGAAATTGGTGGTGGATCGTCGGAGAGCACAATCACTAGATCATCAGGAAGCAATGGAAGAGATCATTATTCGGGTGCTTCGTCTGATGACACCGATTCTGAAAAGGACTTCCTTTTGGATTCCATGGTCGATGTTGAGGAACAAAGTGATGATGATTATTCTCTGTCAGATTCTGATGAGACTGGTGGACTGATGCATGGGCAGAGAAACATAAACATGCTTCAGAGTtgcagaagtgtgtgcgagtttgagatgattaagaagataaacgaaggaacttatggtgttgtctacaaggctagggataagaagactggagaactagtggcattgaagaaggtaaagacgaacatagagagggatggctatccgatgtcatccttgagggaaataaacattctcttgtcttttaatcatccctccattgtgaatgttaaagaagtagttgttgatgattttgatggtacttttatggtaatggagcacatggagtatgaccttaaggggctgatggaggttaagaagcagccctttagcatgagtgaaattaaatcgttgatgcgacaacttcttgaaggtgtcaagtatctccatgataattgggttatccatagggacttgaagtcatcaaacatcctgcttaaccatgatggggagcttaaaatatgtgactttgggttgtcaaggcagtatggaagtccgctgaagccatatactcctcttgtggttacactatggtacagagcacctgaacttttgctgggtgctaaagaatactcaacatcaattgacatgtggtcagtgggttgcataatggctgaattaattgtcaaggagcctctgttcaggggtaaaagtgaacttgaacaactcgacaagatttttcgaaccctgggtacacccgacgagaaaatttggccaggattatccaaattacctggggctaaagcaaattttgttaagcaaccgattaatacactaagaaagaagtttccagccgcgtcatttactggtttgccagttttatctgagctgggatttgacttgttgaagcggctgctaacttatgaccctgaaaagaggataacagccgaagatgctctccttcatgattggttccatgaagcccctcttcccaaatctgatttcaagccaatttttccttcttggcagtga 1719 0.2083 MEAGRKSVSLRREFCKYGSTIGFDHHSTRSFDVEVGGSRNHHLSRSGVERFHVEKEEGEIYVEHELASVVPPPEKKRKFSPIIWDLAVKEERVSSKSRISQIAALSPPRPSLPSSPGAYVVDCGNVMEEFLPDSRSYKQDVEEENDVQGWTIKKSRWDCDDVPSPRGADEKQKHGKVSSSPEIGGGSSESTITRSSGSNGRDHYSGASSDDTDSEKDFLLDSMVDVEEQSDDDYSLSDSDETGGLMHGQRNINMLQSCRSVCEFEMIKKINEGTYGVVYKARDKKTGELVALKKVKTNIERDGYPMSSLREINILLSFNHPSIVNVKEVVVDDFDGTFMVMEHMEYDLKGLMEVKKQPFSMSEIKSLMRQLLEGVKYLHDNWVIHRDLKSSNILLNHDGELKICDFGLSRQYGSPLKPYTPLVVTLWYRAPELLLGAKEYSTSIDMWSVGCIMAELIVKEPLFRGKSELEQLDKIFRTLGTPDEKIWPGLSKLPGAKANFVKQPINTLRKKFPAASFTGLPVLSELGFDLLKRLLTYDPEKRITAEDALLHDWFHEAPLPKSDFKPIFPSWQ 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01191 572 MobiDBLite consensus disorder prediction 152 215 - -
Gma17g01191 572 PANTHER CYCLIN-DEPENDENT KINASE 68 572 - -
Gma17g01191 572 Pfam Protein kinase domain 264 554 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g01191 572 Gene3D Phosphorylase Kinase; domain 1 247 345 - -
Gma17g01191 572 PANTHER CELL DIVISION PROTEIN KINASE 68 572 - -
Gma17g01191 572 CDD STKc_CDC2L1 258 554 IPR045267 GO:0004674|GO:0005524|GO:0006468
Gma17g01191 572 ProSiteProfiles Protein kinase domain profile. 264 554 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g01191 572 SUPERFAMILY Protein kinase-like (PK-like) 258 559 IPR011009 -
Gma17g01191 572 MobiDBLite consensus disorder prediction 227 247 - -
Gma17g01191 572 Gene3D Transferase(Phosphotransferase) domain 1 346 564 - -
Gma17g01191 572 MobiDBLite consensus disorder prediction 181 205 - -
Gma17g01191 572 ProSitePatterns Serine/Threonine protein kinases active-site signature. 383 395 IPR008271 GO:0004672|GO:0006468
Gma17g01191 572 MobiDBLite consensus disorder prediction 152 177 - -
Gma17g01191 572 SMART serkin_6 264 554 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01191 Gma-Chr17 10448110 10452684 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01191 259 560 Core Cell Cycle Gene Families AT5G10270 44.025 6.32e-84 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Gma17g01191 Pkinase 2.3e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01191 K08818 - gmx:100814438 1116.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01191 17 10448110 10452684 Gma17g01191 17 10448110 10452684 ECH
Gma17g01191 17 10448110 10452684 Gma05g00435 05 4127199 4131642 GST