Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01185 ATGGCCCCTCTTTATAGTGCCTTCAACGGCGAAATCGATGGCGAAAATCTCCCTTTAGCTTTTGATATCTGGGCAACCAATCTATGGGCCTATGGCTATTATCCTCATCAACCTGCTATATCGGAGAATAGTTCTTCTAAATTGGTTGATTTCCCCTTTTGCGATGGCACCATCATCAGGGATAACAAAAGGGTCAAGAGAACCGTGTGTTTCCCCATTTATAACAGCGTTAGTTGCCATAGTTTCTTCAACACCAACAGCAGTAGTAGGAATAGCATACCAAAACTCCACTTCAGAGATCACATACGGACTTACACTCAAAGATATCTCGCAGCTGAACCCGTAGAGGAGGCATCAGAAGATACAAACAGTTCAGAAAGTAGTGGAGGCGAAGAAGATGGGTGTGCTGATGGAGTGAGGCTTGTTCAGCTTCTAATAGCGTGTGCGGAAGCGGTGGCTTGCCGCGACAAGTCACACGCTTCCATATTACTTTCCGAACTTAAAGCGAATGCTTTAGTGTTCGGATCCTCATTCCAAAGAGTTGCTTCCTGTTTCGTCCAAGGCCTCACCGAGAGGCTCAATCTGATTCAGCCCATCGGGTCCGCGGGCCCGATGATGGCACCCGCCATGAACATCATGGACGCCGCCTCGGACGAAATGGAGGAAGCATACAGGTTGGTTTATGAACTGTGTCCGCACATCCAGTTCGGACACTATTTGGCTAATTCCACAGTATTGGAAGCCTTTGAGGGTGAGAGTTTTGTCCATGTCGTGGACCTAGGCATGAGTCTTGGTCTAAGACATGGACACCAATGGAGAGCTCTGATCCAGAGTCTCGCCAACCGTGCAAGTGGCGAACGCGTTCGTCGCCTGCGGATCACGGGGGTGGGACTCTGTGTCAGACTTCAAACCATTGGAGAAGAACTCTCCGTATATGCTAACAATTTGGGTATCAACTTGGAGTTCTCAGTGGTTAATAAGAATTTGGAAAATCTGAAACCAGAGGACATAGAAGTGAGGGAAGAAGAAGTTCTTGTGGTGAACAGCATTCTGCAGCTTCATTGCGTGGTGAAGGAGAGCCGCGGGGCTTTGAATTCGGTGCTGCAGATGATTCACGGGCTTGGACCCAAAGTGTTGGTGATGGTTGAGCAGGACTCGAGTCATAATGGACCCTTTTTTCTAGGGAGGTTTATGGAATCATTGCACTATTACTCTTCAATTTTTGACTCGTTGGATGTTATGCTGCCAAAGTATGACACTAAGAGGGCAAAGATGGAGCAGTTTTACTTTGCCGAGGAAATAAAGAACATTGTGAGCTGTGAGGGGCCGTTGAGAATGGAGAGGCACGAGAGGGTGGACCAGTGGAGAAGGAGAATGAGCAGAGCTGGGTTTCAAGCTGCACCTATAAAGATGGTGGCTCAGTCTAAGCAGTGGCTTCTCAAGAACAAGGTTTGTGAGGGTTATACTGTTGTGGAAGAGAAGGGGTGTTTGGTTTTTGGATGGAAGTCGAGGCCTATTGTTGCAGTTTCTTGCTGGAAATGCTGA 1545 0.4777 MAPLYSAFNGEIDGENLPLAFDIWATNLWAYGYYPHQPAISENSSSKLVDFPFCDGTIIRDNKRVKRTVCFPIYNSVSCHSFFNTNSSSRNSIPKLHFRDHIRTYTQRYLAAEPVEEASEDTNSSESSGGEEDGCADGVRLVQLLIACAEAVACRDKSHASILLSELKANALVFGSSFQRVASCFVQGLTERLNLIQPIGSAGPMMAPAMNIMDAASDEMEEAYRLVYELCPHIQFGHYLANSTVLEAFEGESFVHVVDLGMSLGLRHGHQWRALIQSLANRASGERVRRLRITGVGLCVRLQTIGEELSVYANNLGINLEFSVVNKNLENLKPEDIEVREEEVLVVNSILQLHCVVKESRGALNSVLQMIHGLGPKVLVMVEQDSSHNGPFFLGRFMESLHYYSSIFDSLDVMLPKYDTKRAKMEQFYFAEEIKNIVSCEGPLRMERHERVDQWRRRMSRAGFQAAPIKMVAQSKQWLLKNKVCEGYTVVEEKGCLVFGWKSRPIVAVSCWKC 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01185 514 ProSiteProfiles GRAS family profile. 132 513 IPR005202 -
Gma17g01185 514 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 38 513 IPR005202 -
Gma17g01185 514 Pfam GRAS domain family 141 513 IPR005202 -
Gma17g01185 514 PANTHER DELLA PROTEIN RGL1-LIKE 38 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01185 Gma-Chr17 10378224 10379768 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01185 133 514 GRAS Transcription Factor Family AT1G66350 37.726 1.98e-77 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma17g01185 GRAS 8.8e-109 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01185 - - gmx:100813548 1007.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00427 05 4039196 4040731 Gma17g01185 17 10378224 10379768 ECH
Gma17g01185 17 10378224 10379768 Gma17g01185 17 10378224 10379768 ECH
Gma17g01185 17 10378224 10379768 Gma05g00427 05 4039196 4040731 GST