Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma17g01158 | ATGGAAAACATAGACACCTCAAAATTTTCGCACCAATCTCAAAACCAAAACAAGAATAATATTCCCTTGATGTCTATTGAAATATTAGACAAGTCCTATGAGAAGAGAGTCGTGAATAAGGTTCCAAAAGTAGCAAACAAGAGTGAGAAAAAGTTTCTTGGGGTGAGACAAAGACCTTCAGGAAGATGGATTGCTGAGATCAAGGACTCCTCTCAGAAACTAAGACTTTGGTTAGGAACTTTTGACAAAGCAGAAGAAGCTGCCTTGGCTTATGACTGTGCTGCAAGGCTTCTTAGAGGGAGAAATGCCAAAACAAACTTTCCAAACAACCCTGGAATCATGAACACTACTCATGAAGAAGATTGCAGCATTTTGGTCATGCCTTGGAAAAACCAGATCATGGTGAGAGACGAATTTGACACCCTTGTTGAGGAAACTATAGTTTGTTCCATTCCTGAACAAGGTTCTGGTTGTTGTGGAATTTCATTTGGAAGTTCTAAGGTTTATTCTTCTGTTGTTGTAGCTCCTTCTTTCAGTGCTTCTCATGATGAAACCTCCTAA | 561 | 0.3939 | MENIDTSKFSHQSQNQNKNNIPLMSIEILDKSYEKRVVNKVPKVANKSEKKFLGVRQRPSGRWIAEIKDSSQKLRLWLGTFDKAEEAALAYDCAARLLRGRNAKTNFPNNPGIMNTTHEEDCSILVMPWKNQIMVRDEFDTLVEETIVCSIPEQGSGCCGISFGSSKVYSSVVVAPSFSASHDETS | 186 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma17g01158 | 186 | Gene3D | AP2/ERF domain | 50 | 109 | IPR036955 | GO:0003700|GO:0006355 | |
Gma17g01158 | 186 | ProSiteProfiles | AP2/ERF domain profile. | 51 | 108 | IPR001471 | GO:0003700|GO:0006355 | |
Gma17g01158 | 186 | SMART | rav1_2 | 51 | 114 | IPR001471 | GO:0003700|GO:0006355 | |
Gma17g01158 | 186 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF110-LIKE | 149 | 185 | - | - | |
Gma17g01158 | 186 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF110-LIKE | 1 | 126 | - | - | |
Gma17g01158 | 186 | PANTHER | SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR | 1 | 126 | - | - | |
Gma17g01158 | 186 | Pfam | AP2 domain | 51 | 100 | IPR001471 | GO:0003700|GO:0006355 | |
Gma17g01158 | 186 | CDD | AP2 | 50 | 110 | IPR001471 | GO:0003700|GO:0006355 | |
Gma17g01158 | 186 | SUPERFAMILY | DNA-binding domain | 51 | 109 | IPR016177 | GO:0003677 | |
Gma17g01158 | 186 | PRINTS | Ethylene responsive element binding protein signature | 74 | 90 | IPR001471 | GO:0003700|GO:0006355 | |
Gma17g01158 | 186 | PRINTS | Ethylene responsive element binding protein signature | 52 | 63 | IPR001471 | GO:0003700|GO:0006355 | |
Gma17g01158 | 186 | PANTHER | SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR | 149 | 185 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma17g01158 | Gma-Chr17 | 10097001 | 10097633 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma17g01158 | 51 | 110 | AP2-EREBP Transcription Factor Family | AT5G19790 | 71.667 | 3.78e-26 | 99.0 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2/ERF-ERF | Gma17g01158 | AP2 | 1.9e-11 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma17g01158 | - | K09286 | gmx:100800716 | 345.51 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma17g01158 | 17 | 10097001 | 10097633 | Gma17g01158 | 17 | 10097001 | 10097633 | ECH | |
Gma17g01158 | 17 | 10097001 | 10097633 | Gma05g00149 | 05 | 1467102 | 1467716 | GST |