Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01144 ATGGATGCACCACGTGTCTCTCGAGCAATCGGCGACCCCAAAATCCGCCGCGTTGGTTTCTTCGCTTCAGATTCTTCCGCCACCGATTCTCTCATGATCCCGTCGCCACGTCATCGCTCCATTCCGGTTCCGCCGACGCACCCTTCCGGAGATCGCCACGTGGCATCCGGGAGCTACGATCCCACGGAATACCCAAAACTCGCTACTGGCATTGAAAAGAGAGGGGAGGAAGAGGAAGAGAAAGAGGTTCTGCAATCAAGCTTAAAGCCGTTGAAAGCAAAAACTACCAAGGCTGAGAGACGGGCCTTGCAGGAGGCACAGAGAGCTGCTAAAGCTGCTTCTAAAGACGAGGGAAGTAAAGCAGTTGCTGAATCTGGTCGAGGCACCCCAGGTAAAAGTACAAAGCAGTCTTCACAAAAGAAAGGTGGTCCTTCCTGTGTGTCTCCAGTGGCCACTGATAAGAATGCAGGAAATCGTCCTCTGGATAAAGATAGGAAAATGGATGCTCCTTCTCCGCGAATGCAATTTGATGACAAAAGCCGATTGGAAAAGGCTAGAAGATGTGCAGTAGTCAATCCAACTGAATCTAGAAACAAAGTTGAATTATTTCAGCATTTGCCTCAGTATGAATACGGAACTCAGCTTCCTAATCTTGAATCAAAGTTTTTCCAAATTGGTTCAGTGCATCCTGCTGTATTTGAGGTTGGACTGCGTTATTCAGCAGGAGATATATCAGGGGGTAATGCTCGTTGTATTGCAATGCTAAGAGCATTTCAAGATGCCATTAGAGATTACTGCACACCACATGAAAAGGTCCTTGTTAGGGATTTAGCTTCAAAAATCAGTAGTTATGTATCTTTCTTTACTGAATGTAGACCACTTTCTATGAGCATGGGAAATGCAATTAGGTTTGTAAAGAGTCGTATTGTCAATCTGACTTTAAATCATTCGGAGTTTGAGGCAAAAACAACCCTGTGTTCTGATATTGACCGGTTCATAAATGAAAAAATAATTCTTGCTGATAAGGTGATTGTCCGACATGCTTTTACAAAGGTTAAGGATGGGGATGTTCTTCTCACATATGGATTGTCATGTGTTGTTGAGATGATTCTTTTATATGCCTATGAGCAAGGTAAAAAGTTCCGTGTGGTGGTGGTAGATTCACGACCTAGGCTTGAAGGTCAGGCCTTACTTCGTAGGCTAGTGGCTAAGGGCCTGAGTTGCACATATACTCATATAAATGCTGTTTCTTATATCATGCATGAGGTCACACGGGTTCTTCTGGGAGCTTCTGCAGTTTTGTCTAATGGAACTGTATATTCAAGGGTTGGGACTTCTTGTGTTGCAATGGTCGCTCATGCCTTTCATGTTCCTGTATTGATCTGTTGTGAAGCATATAAATTTCATGAAAGGGTGCAACTGGATTCAATATGTTCTAATGAACTAGGTGACCCAGATGCTATTGCCAGGGTTCCTGGACGAATGGATGTCAGTTATCTTAGCAATTGGGCCAGTGAAGATAATTTGAGGCTTTTGAATTTGATGTATGATGCTACTCCTTCAGATTATGTCTCGGTTATTGTGACAGATTATGGCATGCTCCCTCCTACAAGCGTGCCTGTAATAGTACGTGAATATGGACGAGAGCATTTGTTGATGTAG 1662 0.4386 MDAPRVSRAIGDPKIRRVGFFASDSSATDSLMIPSPRHRSIPVPPTHPSGDRHVASGSYDPTEYPKLATGIEKRGEEEEEKEVLQSSLKPLKAKTTKAERRALQEAQRAAKAASKDEGSKAVAESGRGTPGKSTKQSSQKKGGPSCVSPVATDKNAGNRPLDKDRKMDAPSPRMQFDDKSRLEKARRCAVVNPTESRNKVELFQHLPQYEYGTQLPNLESKFFQIGSVHPAVFEVGLRYSAGDISGGNARCIAMLRAFQDAIRDYCTPHEKVLVRDLASKISSYVSFFTECRPLSMSMGNAIRFVKSRIVNLTLNHSEFEAKTTLCSDIDRFINEKIILADKVIVRHAFTKVKDGDVLLTYGLSCVVEMILLYAYEQGKKFRVVVVDSRPRLEGQALLRRLVAKGLSCTYTHINAVSYIMHEVTRVLLGASAVLSNGTVYSRVGTSCVAMVAHAFHVPVLICCEAYKFHERVQLDSICSNELGDPDAIARVPGRMDVSYLSNWASEDNLRLLNLMYDATPSDYVSVIVTDYGMLPPTSVPVIVREYGREHLLM 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01144 553 MobiDBLite consensus disorder prediction 67 122 - -
Gma17g01144 553 PANTHER NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN 72 553 - -
Gma17g01144 553 MobiDBLite consensus disorder prediction 157 181 - -
Gma17g01144 553 Gene3D - 340 546 IPR042529 -
Gma17g01144 553 Pfam Initiation factor 2 subunit family 244 536 IPR000649 GO:0044237
Gma17g01144 553 Coils Coil 96 116 - -
Gma17g01144 553 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 72 553 - -
Gma17g01144 553 SUPERFAMILY NagB/RpiA/CoA transferase-like 228 546 IPR037171 -
Gma17g01144 553 MobiDBLite consensus disorder prediction 24 181 - -
Gma17g01144 553 MobiDBLite consensus disorder prediction 129 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01144 Gma-Chr17 9964659 9968775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01144 76 553 Eukaryotic Initiation Factors Gene Family AT5G38640 66.942 0.0 654
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01144 K03680 - gmx:100795256 1057.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01144 17 9964659 9968775 Gma17g01144 17 9964659 9968775 ECH