Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01134 ATGTCATCAAGTGGAACCATTTGGAGCTATGAGGAAGAAAAAGCATTTGAGAATGCCATAGCTATGCATTGGATTGAGGAATCCTCAAAAGAGCAATGGGAGAAAATTGCTTCAGCAGTTCCCAGCAAAAGCATGGAAGATGTGAAGCAACATTACCAGGTTCTAGTAGAGGATGTAAGTGCAATAGAGGCAGGTCACATATCATTCCCAAACTATGCTGCTTCTGAGGAAATCACATCTTCAAATAAGGACTTTCATGGCTCTTCCAAGGCCACAAGCTCAGATAAAAGATCAAATTGTAATTATGGACGTGGTTTTTCTGGGTTAGGACATGACTCCACCACTCATAGTAGTGGTAAAGGAGGCTTGTCAAGGTCATCAGAACAAGAAAGAAGAAAAGGAATCCCATGGACTGAAGAGGAACACAGGTTATTTTTACTTGGTCTAGAGAAGTTTGGAAAAGGAGATTGGAGAAGCATTTCAAGGAACTTTGTGATATCTAGGACTCCCACTCAAGTGGCAAGCCATGCACAAAAGTACTTCATAAGGTTGAATTCAATGAATAGAGACAGGAGGAGGTCTAGTATCCATGATATCACTAGTGTGAACAATGGAGATGTGGCTAATAACCAAGCACCTATTACAGGGCAGCATAGTAGCACAATTCCTTCAAACACAATGGGTGTAGGACAATCCCTTAAGCATAGAGTTCAGGGTCACATACCACCTGGTTTAGGCATGTATGGAACACCAGTTGGACATCCTGTGGCTGCTCCTCCAGGGCACATGGCATCTGCAGTTGGCACTCCTGTCATGCTTCCTCCTGGACCCCACCCCCATGCTCATCCTCATCCACCTTATGTTCTTCCTCTTGCTTACCCAATGGCACCTCCAACAATGCATCAATAA 909 0.4378 MSSSGTIWSYEEEKAFENAIAMHWIEESSKEQWEKIASAVPSKSMEDVKQHYQVLVEDVSAIEAGHISFPNYAASEEITSSNKDFHGSSKATSSDKRSNCNYGRGFSGLGHDSTTHSSGKGGLSRSSEQERRKGIPWTEEEHRLFLLGLEKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNSMNRDRRRSSIHDITSVNNGDVANNQAPITGQHSSTIPSNTMGVGQSLKHRVQGHIPPGLGMYGTPVGHPVAAPPGHMASAVGTPVMLPPGPHPHAHPHPPYVLPLAYPMAPPTMHQ 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01134 302 PANTHER TRANSCRIPTION FACTOR KUA1 1 301 - -
Gma17g01134 302 Gene3D - 1 69 - -
Gma17g01134 302 SUPERFAMILY Homeodomain-like 131 186 IPR009057 -
Gma17g01134 302 MobiDBLite consensus disorder prediction 108 124 - -
Gma17g01134 302 SMART sant 133 183 IPR001005 -
Gma17g01134 302 SMART sant 4 58 IPR001005 -
Gma17g01134 302 PANTHER TRANSCRIPTION FACTOR MYBS1 1 301 - -
Gma17g01134 302 ProSiteProfiles SANT domain profile. 3 52 IPR017884 -
Gma17g01134 302 CDD SANT 8 56 IPR001005 -
Gma17g01134 302 SUPERFAMILY Homeodomain-like 8 62 IPR009057 -
Gma17g01134 302 ProSiteProfiles SANT domain profile. 137 185 IPR017884 -
Gma17g01134 302 ProSiteProfiles Myb-like domain profile. 8 56 IPR001005 -
Gma17g01134 302 Pfam Myb-like DNA-binding domain 136 181 IPR001005 -
Gma17g01134 302 Pfam Myb-like DNA-binding domain 8 55 IPR001005 -
Gma17g01134 302 MobiDBLite consensus disorder prediction 102 135 - -
Gma17g01134 302 Gene3D - 135 187 - -
Gma17g01134 302 ProSiteProfiles Myb-like domain profile. 129 181 IPR001005 -
Gma17g01134 302 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 133 183 IPR006447 GO:0003677
Gma17g01134 302 CDD SANT 136 181 IPR001005 -
Gma17g01134 302 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 129 185 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01134 Gma-Chr17 9830133 9831778 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gma17g01134 Myb_DNA-binding 9.3e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01134 - - gmx:778049 588.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01134 17 9830133 9831778 Gma17g01134 17 9830133 9831778 ECH
Gma17g01134 17 9830133 9831778 Gma05g00123 05 1235977 1237622 GST