Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01129 ATGATAAAGCAAATTCTTAGCAAATTGCCAAAGAAGGTGCCAAAATCTGACTCATCAGATTCTGCAAGGAGTGATTCTAGCAATACCACTACTTTTGGGAATGTTTTTCAGTGTACAAATGTTGGAAGTACCATTTCAAGCAAATTAAATGTTGTGAAGCGGGTATCATCCGTTGTTTTCCCAGCAAGCATGAGTGCTGGAGTGGAAGCAGTTGACCCTTGTCTGTCCTTCAAAGATGTTTCAAATACACAGAAGCAAAGCCTGTTCATTAGTAAGTTGAATCTTTGCTGCAAAGTTTATGACATGAGTGATCCTGATAAGAACACCACAGAGCAAGATCTCAAACGAAAAACGTTGTTGGAGCTTGTTGATTATGTTTCTTCTGGATCTGTTAAGTTCACAGAACCAGCAATCGCCGCATTGTGTAAAATGTGTGCAACTAATTTGTTCAGGGCTTTCCCACCAAAGTTTCGAACAAGTACTACTGGTGGGGAAACAGAAGATGAAGAACCTATATTTGATCCTGCCTGGTCTCACCTACAAGTTGTTTATGATCTACTCCTTCAGTTCATCAATTATAACTCTCTTGATGTGAAGTTGGCAAAAGCACATATAGATCATGCTTTTATTCTAAGATTACTTGACCTTTTTGATTCAGAGGACCCTAGAGAAAGAGATTGCTTGAAAACAATTCTGCACAGAGTCTATGGGAAATTCATGATTCATAGGCCTTTCATACGGAAATCTGTTAGCAACATCATCTACCGGTTTGTTTTCGAGACCGAGCGACATAATGGAATCGCGGAGCTGTTGGAGATTTTTGGGAGTGTCATTAGCGGGTTTGCCTTGCCATTGAAGGAAGAGCACAAGATATTTTTGTTGAGGGCTTTGGTTCCTTTGCACAAACCTAAATCTGTTGGCATTTATCATCAGCAGTTAACATATTGTGTTGTACAGTTCATAGACAAGGACCAAAGACTGGCTAGCTCAGTGATAAAGGGACTATTGAAGTACTGGCCAGTGACAAATAGCCAAAAGGAGCTCATGTTCATCAGTGAGTTGGAAGAGATTTTGGAAATGACTAGCATGGCTGAGTTTCAGAAGATCATGGTCCCACTGTTCCGACGAATGGCTTTCTGCCTCAATAGTTCTCATTATCAGGTGGCTGAAAGAGCACATTTGCTATGGAACAATGAGCACATTCTGAATCTGATAACGCAAAACAGACAGGTGATTCTGCCTCTAGTGTTCTCAGCAATTGTACATAATGGTCAAAGTCATTGGAACCAAGCAGTGCTGAACCTGACTCAGAACATAAGGAAGATGCTGTCTCAGATGGACGAGGAGCTGGTAGCTGCATGCCAACGCAGGATTGAGGAGGAAGATTCAAGTGCAAGTTCTGCAGCTGAGAGGAGAAGAGTAACATGGGAAAGGCTAGAAGCTGCTGCTGCTAATTGTGTCCCAGTTCAATCTACTACTTCTGTAGGTGGAGCTGGAGATGTTTTAGTCCCAGTAAAATCTGCTACATGCTCAGTGGCATGCTAA 1545 0.4175 MIKQILSKLPKKVPKSDSSDSARSDSSNTTTFGNVFQCTNVGSTISSKLNVVKRVSSVVFPASMSAGVEAVDPCLSFKDVSNTQKQSLFISKLNLCCKVYDMSDPDKNTTEQDLKRKTLLELVDYVSSGSVKFTEPAIAALCKMCATNLFRAFPPKFRTSTTGGETEDEEPIFDPAWSHLQVVYDLLLQFINYNSLDVKLAKAHIDHAFILRLLDLFDSEDPRERDCLKTILHRVYGKFMIHRPFIRKSVSNIIYRFVFETERHNGIAELLEIFGSVISGFALPLKEEHKIFLLRALVPLHKPKSVGIYHQQLTYCVVQFIDKDQRLASSVIKGLLKYWPVTNSQKELMFISELEEILEMTSMAEFQKIMVPLFRRMAFCLNSSHYQVAERAHLLWNNEHILNLITQNRQVILPLVFSAIVHNGQSHWNQAVLNLTQNIRKMLSQMDEELVAACQRRIEEEDSSASSAAERRRVTWERLEAAAANCVPVQSTTSVGGAGDVLVPVKSATCSVAC 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01129 514 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 495 IPR002554 GO:0000159|GO:0007165|GO:0019888
Gma17g01129 514 PIRSF PP2A_B56 3 498 IPR002554 GO:0000159|GO:0007165|GO:0019888
Gma17g01129 514 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT 1 495 - -
Gma17g01129 514 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 76 483 IPR002554 GO:0000159|GO:0007165|GO:0019888
Gma17g01129 514 MobiDBLite consensus disorder prediction 1 28 - -
Gma17g01129 514 SUPERFAMILY ARM repeat 86 460 IPR016024 -
Gma17g01129 514 Gene3D - 82 482 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01129 Gma-Chr17 9745594 9749082 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01129 K11584 - gmx:100786778 979.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01129 17 9745594 9749082 Gma17g01129 17 9745594 9749082 ECH
Gma17g01129 17 9745594 9749082 Gma05g00116 05 1131455 1136810 GST
Gma17g01129 17 9745594 9749082 Gma04g01474 04 37249115 37253298 PCT
Gma17g01129 17 9745594 9749082 Gma06g02046 06 31035002 31040728 PCT
Gma06g02045 06 31000569 31005692 Gma17g01129 17 9745594 9749082 PCT