Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01124 ATGGCGTTGTTCATTACTGTTGTTGTTGTTTTGTTCCTGCTGCAGCTGAGTTCGAGTGTCCGAGTGAACTCGGAGCCGACTCAGGACAAGCAAGCCCTCCTCTCTTTCCTCTCCCAAACCCCACACTCGAACCGTCTCCAATGGAACGCTTCGGAATCCGCGTGCGACTGGGTGGGCGTGAAATGCGACGCGTCACGCTCCTTCGTCTACTCGCTCCGTTTACCCGCCGTCGATTTAGTGGGTCGGGTCCCACCCGGTACACTCGGCCGCTTAACCCAGCTTCGGATCCTCAGCCTCCGCTCCAACGCCCTCACCGGCGAGATCCCTTCCGATTTCTCCAACCTCATTTTCCTCCGCAGCCTCTACCTCCAGAAGAACCAATTCTCCGGCGAGTTCCCTCCGAGTCTCACTCGCCTCACTCGCTTGGCTCGCTTGGATCTTTCCTCCAACAATTTCACCGGCCAAATCCCTTTCTCTGTTAACAACTTAACCCACCTCACTGGCCTCTTCTTAGAacgcaaccatttctccggtaaaatccctagcatcactctcaggcttgttaacttcaatgtttcatataacaatctcaacggttcaatccccGAGACACTCTCTGCGTTTCCGGAAACTTCCTTCGTCGGAAACATAGATCTCTGCGGACCGCCGTTGAAGGACTGTACTCCTTTCTTCCCGGCGCCGGCGCCGTCTCCGTCGGAGAATTCAACCCCGGTGAAGACACGTAAGAAGTCCAAGAAGCTCTCCACCGGCGCCATTGTTGCAATCGTTGTGGGGTCCGTTCTTGGCTTGGCGTTGTTGCTGCTGCTGCTGTTGCTGTGTCTCCGGCGGCGGCGAAGACAGCCCGCGAAGCCGCCGAAGGCGGTGGTGGAGGAGCATAGCGTGCCGGCGGAGGCGGGGACGTCGTCGTCGAAGGATGATATCACCGGGGGTTCGGCGGAGGTGGAGAGGAACAAGCTTGTGTTCTTCGAAGGGGGAATTTACAGTTTCGATTTGGAGGATTTGTTGAGGGCTTCGGCGGAGGTGTTGGGGAAGGGTAGCGTGGGGACTTCGTATAAGGCGGTGCTGGAGGAAGGAACCACCGTGGTGGTGAAGAGGCTGAAGGATGTTGTGGTGACGAAGAAAGAGTTCGAGACGCAAATGGAGGTTCTGGGGAATATTAAGCACGAGAATGTGGTTCCTCTCAGAGCCTTCTACTTCTCCAAGGACGAGAAATTGCTCGTTTATGATTACATGTCCGCTGGGAGCTTGTCTGCGCTGCTACACGGGAGCAGAGGGTCTGGGCGAACACCACTCGACTGGGACAGCCGAATGAAAATAGCCCTAGGAGCAGCAAGAGGGCTGACATGCCTCCATGTGGCAGGCAAGGTGGTCCACGGCAACATCAAATCTTCCAACATCCTCCTCCGGGGACCCGACCATGATGCCGGCGTTTCGGACTTCGGCCTCAACCCCTTGTTCGGAAACGGAGCCCCGTCAAACCGTGTGGCGGGATACCGGGCACCCGAAGTGGTCGAAACCCGGAAGGTGAGCTTCAAGTCCGACGTGTACAGCTTGGGAGTGTTGCTGCTGGAGCTTCTAACGGGAAAAGCGCCAAACCAAGCCTCGCTCGGGGAAGAGGGCATTGATCTTCCCAGGTGGGTTCAGTCAGTTGTGCGTGAAGAATGGACCGCAGAAGTGTTCGATGCGGAGCTCATGAGGTTCCAAAACATCGAGGAGGAGATGGTTCAACTGTTGCAAATTGCTATGGCGTGCGTTTCCGTTGTGCCGGATCAGAGGCCTAGCATGCAAGACGTGGTGCGTATGATTGAGGACATTAACCGTGGCGAGACAGATGATGGCTTGAGACAATCTTCTGATGACCCTTCCAAAGGATCCGAGGGTCACACACCACCCCCAGAGTCAAGGACTCCACCTAGGTCACTCACACCTTAA 1953 0.5381 MALFITVVVVLFLLQLSSSVRVNSEPTQDKQALLSFLSQTPHSNRLQWNASESACDWVGVKCDASRSFVYSLRLPAVDLVGRVPPGTLGRLTQLRILSLRSNALTGEIPSDFSNLIFLRSLYLQKNQFSGEFPPSLTRLTRLARLDLSSNNFTGQIPFSVNNLTHLTGLFLERNHFSGKIPSITLRLVNFNVSYNNLNGSIPETLSAFPETSFVGNIDLCGPPLKDCTPFFPAPAPSPSENSTPVKTRKKSKKLSTGAIVAIVVGSVLGLALLLLLLLLCLRRRRRQPAKPPKAVVEEHSVPAEAGTSSSKDDITGGSAEVERNKLVFFEGGIYSFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKDVVVTKKEFETQMEVLGNIKHENVVPLRAFYFSKDEKLLVYDYMSAGSLSALLHGSRGSGRTPLDWDSRMKIALGAARGLTCLHVAGKVVHGNIKSSNILLRGPDHDAGVSDFGLNPLFGNGAPSNRVAGYRAPEVVETRKVSFKSDVYSLGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDAELMRFQNIEEEMVQLLQIAMACVSVVPDQRPSMQDVVRMIEDINRGETDDGLRQSSDDPSKGSEGHTPPPESRTPPRSLTP 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01124 650 Gene3D Transferase(Phosphotransferase) domain 1 418 630 - -
Gma17g01124 650 SUPERFAMILY L domain-like 27 208 - -
Gma17g01124 650 Gene3D Ribonuclease Inhibitor 186 230 IPR032675 -
Gma17g01124 650 ProSiteProfiles Protein kinase domain profile. 343 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g01124 650 Pfam Protein kinase domain 346 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g01124 650 MobiDBLite consensus disorder prediction 611 650 - -
Gma17g01124 650 PANTHER OS05G0588300 PROTEIN 11 630 - -
Gma17g01124 650 Pfam Leucine rich repeat N-terminal domain 27 63 IPR013210 -
Gma17g01124 650 SUPERFAMILY Protein kinase-like (PK-like) 347 612 IPR011009 -
Gma17g01124 650 MobiDBLite consensus disorder prediction 611 629 - -
Gma17g01124 650 MobiDBLite consensus disorder prediction 290 316 - -
Gma17g01124 650 Gene3D Ribonuclease Inhibitor 26 185 IPR032675 -
Gma17g01124 650 Gene3D Phosphorylase Kinase; domain 1 311 417 - -
Gma17g01124 650 PANTHER OS05G0480400 PROTEIN 11 630 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01124 Gma-Chr17 9670266 9673535 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01124 4 630 Receptor kinase-like Gene Family AT5G58300 52.433 0.0 613
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gma17g01124 Pkinase 3.2e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01124 - - gmx:102662178 1139.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01124 17 9670266 9673535 Gma17g01124 17 9670266 9673535 ECH