Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01123 ATGGATAGGGACGATTCTGCAATACCCCTTAATACCTCAATTAGATACTCATATTTTCAGGTTTTGCCAAATATGGCTTCAATAAAAGATACCAATGCCATTTCATACAATCTTTGTGGTTTGGTTAGGATGGCTAGTGGTGATCTGAAAGTGAAGAGTTTCTCCGCCGTGGTGGGACCTAACGGGAGCGGGAAGAGCAACGTCATCGATGCGATGCTGTTTGTGTTCGGGAAGCGAGCCAAGCAGATGCGGCTGAACAAAGTTTCGGAGTTAATACACAATTCCACCAATCACCAGAATTTGGATAGTGCAGGGGTTTCAGTTCATTTTCAAGAGATTGTGGATTCGGGTGAAACACATGTACAAACTCACTTTTCCAAAACAGGGAACCAGGTAAACTTGGGAACCACACGAGATCAAATTATGTCCGAGAGAAAAAGGAGACAGCTAATGGCTGAGAGATTCATAGCGTTTTCATCTATTATACCTGGCTTGAAGGTCAGTGCTTAA 510 0.4314 MDRDDSAIPLNTSIRYSYFQVLPNMASIKDTNAISYNLCGLVRMASGDLKVKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLDSAGVSVHFQEIVDSGETHVQTHFSKTGNQVNLGTTRDQIMSERKRRQLMAERFIAFSSIIPGLKVSA 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01123 169 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 4 51 140 - -
Gma17g01123 169 Gene3D - 22 160 IPR027417 -
Gma17g01123 169 PANTHER - 51 140 - -
Gma17g01123 169 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 52 124 IPR027417 -
Gma17g01123 169 Pfam RecF/RecN/SMC N terminal domain 52 120 IPR003395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01123 Gma-Chr17 9650063 9652571 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01123 118 166 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 36.667 3.13e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01123 K06675 - gsj:114371035 218.779