Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01107 ATGGAGGACAGAAAAGCCAACACAATCTCTGTAATATCAGTGATTGCACTGATCATCCTCATCATCGTCGCTCGTGTTTCCTTGAAGCTCTCGCGTGCCTTCTTCCTCATATGTGGCGCTTCTATTGCTGTGATCCTCGCTGTCTTTTCTTGTGCACTCATAAGGCACCGTTACAACCACAGAAGGAGGTTGTTGGAGTCACAGTTGAAGACAGAAGGGAGAGAGCTTCGAATAGAGTACAGTTTCCTAAGAAAAGTTGCTGGTGTTCCCACAAAGTATCGTTTCAAGGAGCTTGAAGAAGCAACGGATGGTTTTCAAGCACTTTTAggaaaagggtcctctgcttcggtcttcaaaggcattctcaacgatggaacttcggttgcggtgaaacgaatcgacggcgaggagcgaggggagaaagaattcagatcagaagttgcagccattgcaagtgtgcatcatgtcaacctcgtacggCGTGTGAGGGTGGATGAACCACCTGGTTCAAGAATGATTCTTGTTGATTTGCTTGCTGTTGATGAAGATCCTGCAGATCATAGAAATTTGGCAAGGTTGTTGACATCTGTGTCCAGCCATGTGGATTGTACATCTACTTACTCTTTGGGAACCACAAACACTATTTTATCTGGTAGATAG 660 0.3379 MEDRKANTISVISVIALIILIIVARVSLKLSRAFFLICGASIAVILAVFSCALIRHRYNHRRRLLESQLKTEGRELRIEYSFLRKVAGVPTKYRFKELEEATDGFQALLGKGSSASVFKGILNDGTSVAVKRIDGEERGEKEFRSEVAAIASVHHVNLVRRVRVDEPPGSRMILVDLLAVDEDPADHRNLARLLTSVSSHVDCTSTYSLGTTNTILSGR 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01107 219 ProSitePatterns Protein kinases ATP-binding region signature. 109 131 IPR017441 GO:0005524
Gma17g01107 219 ProSiteProfiles Protein kinase domain profile. 103 219 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g01107 219 PANTHER RECEPTOR-LIKE KINASE 1 160 - -
Gma17g01107 219 SUPERFAMILY Protein kinase-like (PK-like) 86 177 IPR011009 -
Gma17g01107 219 Pfam Protein tyrosine and serine/threonine kinase 106 178 IPR001245 GO:0004672|GO:0006468
Gma17g01107 219 PANTHER RECEPTOR-LIKE KINASE 161 219 - -
Gma17g01107 219 Gene3D Phosphorylase Kinase; domain 1 66 166 - -
Gma17g01107 219 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 1 160 - -
Gma17g01107 219 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 161 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01107 Gma-Chr17 9458508 9459854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01107 1 160 Receptor kinase-like Gene Family AT5G20050 67.500 6.90e-72 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Gma17g01107 PK_Tyr_Ser-Thr 2.9e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01107 - - gmx:100779485 284.648
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01107 17 9458508 9459854 Gma17g01107 17 9458508 9459854 ECH
Gma17g01107 17 9458508 9459854 Gma06g01950 06 22732172 22733536 PCT
Gma06g01950 06 22732172 22733536 Gma17g01107 17 9458508 9459854 PCT