Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01079 ATGGATGCCATATTGGGCTACCTAATAATTTTAGTGATGACTTCGGCAGTACAAGCCCAATTGAAAGCTGGGTTTTATTCTACTCCATGTCCAAATGCTGAGGCAATTGTAGGGTCCACCGTTGTATCCCACTTCAGCAAAGATCTAACCATTGCTCCTGGCCTGCTCAGGCTTCATTTCCATGATTGCTTTGTCCAAACAGAATGCAGATTCTTCAGTTATCGTCTATACAATTTCACAACCTCTGGTAGTCCTGATCCCACTATAAACGTAGCTTTTTTAGCTCAACTTCAAGCACTTTGTCCAAAAAATGGAGATGGCTTGAGAAGGGTGGCCTTGGACAAAGATAGTCAAGCTAAATTTGATGTTAGTTTCTTCAAGAATGTGCGTGATGGTAAATGGGGTTCTTGA 411 0.4185 MDAILGYLIILVMTSAVQAQLKAGFYSTPCPNAEAIVGSTVVSHFSKDLTIAPGLLRLHFHDCFVQTECRFFSYRLYNFTTSGSPDPTINVAFLAQLQALCPKNGDGLRRVALDKDSQAKFDVSFFKNVRDGKWGS 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01079 136 PANTHER PEROXIDASE 8 66 - -
Gma17g01079 136 PANTHER PEROXIDASE 67 133 - -
Gma17g01079 136 SUPERFAMILY Heme-dependent peroxidases 67 134 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gma17g01079 136 ProSiteProfiles Plant heme peroxidase family profile. 20 66 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma17g01079 136 SUPERFAMILY Heme-dependent peroxidases 18 65 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gma17g01079 136 PANTHER PEROXIDASE 25-RELATED 67 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma17g01079 136 PANTHER PEROXIDASE 25-RELATED 8 66 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma17g01079 136 Gene3D - 24 66 - -
Gma17g01079 136 ProSitePatterns Peroxidases active site signature. 52 63 IPR019794 GO:0004601
Gma17g01079 136 ProSiteProfiles Plant heme peroxidase family profile. 67 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma17g01079 136 PRINTS Plant peroxidase signature 30 49 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma17g01079 136 PRINTS Plant peroxidase signature 54 74 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma17g01079 136 Gene3D Peroxidase, domain 2 67 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01079 Gma-Chr17 9268884 9269585 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01079 4 66 Peroxidase AT2G41480 62.500 3.44e-21 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01079 K00430 - gmx:100816487 135.191