Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01020 ATGGGAGCAGTGATTCTCCCAGATCTCGGCACCGAGATTTTGATTCCCGTCTGCGCCATCATTGGAATAGCGTTCGCCCTCTTCCAGTGGGTCCTCGTCTCTAAGGTCAAGCTCTCCGCTGCCAGAGACGCTTCCTCCAACGCCGGCGGCGGCAAAAATGGCTACAACGATTACCTCATCGAAGAAGAGGAAGGCCTCAACGACCACAACGTCGTCCTCAAATGCGCCGAAATCCAAAACGCCATTTCCGAAGGAGCAACCTCTTTCCTTTTCACTGAGTATAAGTACGTGGGAATCTTCATGGTGGCTTTTGCCATTTTGATATTCCTCTTCCTTGGCTCTGTGGAAGGATTCAGCACAAGCTACCAGCCTTGCACCTATGACCAAACTAAAATGTGTAAGCCAGCTCTTGCCACTGCTGTTTTCAGCACCATATCTTTCCTGCTTGGAGGTGTCACATCGCTTATTTCTGGATTCCTTGGAATGAAAATTGCAACTTATGCCAATGCAAGAACCACCCTGGAGGCAAGAAAGGGTGTTGGAAAGGCTTTCATTACGGCTTTTAGATCTGGTGCAGTTATGGGTTTTCTCCTTGCTGCAAATGGTCTTTTGGTTCTTTACATTGCCATCAACTTGTTCAAGATTTACTATGGTGATGACTGGGGTGGTCTTTTTGAGGCCATCACTGGTTATGGTCTTGGTGGGTCTTCTATGGCTTTGTTTGGAAGAGTAGGTGGAGGTATCTATACTAAGGCTGCTGATGTTGGTGCTGATCTTGTCGGAAAGGTCGAAAGAAACATCCCGGAAGATGATCCAAGAAATCCAGCTGTGATTGCtgataatgttggtgataatgttggtgataTCGCTGGTATGGGATCTGATCTTTTTGGTTCATATGCCGAGTCATCCTGTGCTGCTCTTGTTGTTGCTTCCATCTCTTCTTTTGGGGTGAATCATGAGTTGACTGCTATGTTATACCCTCTAATTATCAGTTCTGTGGGTATCCTTGTTTGTTTGCTCACAACTTTATTTGCAACTGACTTCTTTGAGATCAAGGCTGTAAAGGAGATTGAGCCTGCATTGAAGAAACAGCTCATCATTTCCACTGCCTTGATGACTATTGGGATTGCAATTGTTAGTTGGATTGCACTCCCAACTTCCTTCACTATCTTCAATTTTGGAGTGCAGAAAGATGTCAAGAATTGGCAGCTATTCTTGTGTGTTGCTGTTGGTCTTTGGGCAGGGCTTATTATTGGATTTGTAACTGAGTACTATACTAGCAATGCATATAGTCCGGTGCAAGACGTTGCAGACTCCTGCAGGACTGGTGCTGCAACTAATGTTATCTTTGGCCTTGCCTTGGGATACAAGTCTGTTATTATTCCAATTTTTGCTATTGCAATCAGTATTTTTGTTAGTTTCACCTTTGCTGCCATGTATGGTATTGCCGTTGCTGCACTTGGCATGCTGAGTACCATTGCCACCGGATTGGCCATTGATGCATATGGTCCAATCAGTGACAATGCTGGAGGTATTGCTGAGATGGCCGGTATGAGTCACAGAATTAGAGAGAGAACTGATGCCCTTGATGCTGCCGGAAACACAACTGCCGCAATTGGGAAGGGATTTGCCATCGGTTCTGCTGCCCTTGTATCTCTGGCCCTCTTTGGTGCCTTTGTGAGCCGAGCTGCTATTACAACTGTTGATGTGTTGACTCCAAAGGTTTTCATTGGTTTGATTGTGGGTGCAATGCTTCCTTACTGGTTTTCTGCCATGACCATGAAGAGTGTGGGAAGTGCTGCTCTGAAGATGGTTGAGGAAGTACGCAGGCAATTCAACACCATTCCAGGATTGATGGAGGGAACTGCTAAGCCTGACTACGCCACTTGTGTTAAGATCTCCACTGATGCTTCCATTAAAGAAATGATTCCACCTGGTGCTCTTGTCATGCTTACACCCCTTGTTGTTGGAATCCTTTTTGGTGTCGAAACACTTTCTGGTGTCCTAGCTGGATCTTTGGTGTCTGGTGTACAGATTGCTATCTCTGCATCCAACACCGGTGGTGCTTGGGATAATGCCAAGAAGTACATTGAGGCTGGTGCTTCTGAGCATGCAAGGAGCCTTGGTCCAAAAGGGTCAGATTGTCACAAGGCAGCTGTTATTGGTGACACCATTGGAGACCCCCTCAAGGATACATCAGGGCCTTCACTTAACATCCTTATCAAGCTCATGGCCGTTGAGTCTCTTGTGTTTGCTCCCTTCTTTGCGACACATGGTGGCCTACTCTTCAAGATCTAA 2301 0.4576 MGAVILPDLGTEILIPVCAIIGIAFALFQWVLVSKVKLSAARDASSNAGGGKNGYNDYLIEEEEGLNDHNVVLKCAEIQNAISEGATSFLFTEYKYVGIFMVAFAILIFLFLGSVEGFSTSYQPCTYDQTKMCKPALATAVFSTISFLLGGVTSLISGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLYIAINLFKIYYGDDWGGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGVNHELTAMLYPLIISSVGILVCLLTTLFATDFFEIKAVKEIEPALKKQLIISTALMTIGIAIVSWIALPTSFTIFNFGVQKDVKNWQLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAISIFVSFTFAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAAITTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLVVGILFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARSLGPKGSDCHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFATHGGLLFKI 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01020 766 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 1 766 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Gma17g01020 766 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 9 757 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Gma17g01020 766 Pfam Inorganic H+ pyrophosphatase 22 752 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Gma17g01020 766 PANTHER PYROPHOSPHATE-ENERGIZED VACUOLAR MEMBRANE PROTON PUMP 1 766 - -
Gma17g01020 766 TIGRFAM V_PPase: V-type H(+)-translocating pyrophosphatase 11 762 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Gma17g01020 766 PIRSF H+-PPtase 11 765 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01020 Gma-Chr17 8678683 8682856 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01020 5 630 Primary Pumps ATPases AT1G15690 88.217 0.0 1124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01020 K23025 - gmx:100775864 1456.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01020 17 8678683 8682856 Gma17g01020 17 8678683 8682856 ECH
Gma17g01020 17 8678683 8682856 Gma13g01433 13 29116033 29120819 GST