Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01003 ATGTTGCGAGTGAAGGGAGGGAAGAGACCACCTTGGGTGGGACTTGGAGCTGCAGTGTGGGTTCAGATTGCTTCAGGAAATGGTTACTGTTTCCCTCTCTATTCCCATTCCTTGAAATCCGTTTTGGGTTTCAACCAGAGCCAGATTACCCTTCTTGGTGTTGCCAATGATATTGGTGAGAATGTTGGCATTCTTCCCGGACTCGCCTGCAACAAGTTTCCTCCTTGGCTCATTCTCTTCATCGGTGCTCTCTTTTCTTTCCTTGGTTTTGGTGTTCTCTGGCTTGCTATCACCAAAACACTTGATTCTCTTCCTTTCATCTTGCTATGGTTTGCACTTGCTGTTGCTACCAACAGTTGTGCATGGTTATCTACTGCTATTCTTGTCACCAACATGAGAAATTTCCCTGTCAGTAGAGGCACAGTTGCAGGAATCCTGAAAGGTTATTCGGGACTCAGTGCTGCAGTTTTTACTCAAATTTACAGCGTGGTTTTTCACAATTCTTCATCCAAGTTCCTTTTGTTTCTTGCCATTGGTATTCCTGCTTTATGCTTCAGTACCATGTTTCTTGTTCGGCCTTGTACTCCTGCTTCTGGTGATGATTCTGCTGAAAAGGGGCATTTTTTGTTTATCCAAGGTGCTAGTGTGGCCATGGGTTTATATATTCTTGCTACAACTCTACTTGACAACTTTATCCACATAAGGGACAGTGTTTCATATGCTTTGTTGGCTGTGATGATTCTTCTTCTCTTGGCTCCACTTGTTATCCCTATAAAGATGACACTGTGTCCCAGAAAAGCCTCTAGCACAGAAATTCCTGAGGAACATGTTGGATCTACAGACTATTTGGTTCAAGATGGCAAAGACAACGTAGAGCCATTGCTATCATCTTCATCAGCTAGTGGTCTTGGAAGTTTTAATGATGTGGTGGATGGTTCAGCTGAGGTGGCTATGCTTCTTGCTGAGGGTGAGGGAGCAGTGAGGAAGAAGAGAAGGCCCAAAAGAGGGGAAGATTTTAAGTTTACTGAGGCTCTAGTTAAGGCAGATTACTGGTTACTATTTTTTGTTTACTTTGTTGGTGTTGGAACTGGGGTTACTGTACTTAATAATTTGGCTCAAATAGGCATTGCACAAGGTATGGAAGATACCACAATCTTGCTGTCACTTTTCAGTTTTTTCAATTTTGTGGGTCGGCTTGGTGGAGGAGTTGTTTCAGAATATTTTGTCAGGACAAAAACGATTCCAAGGACAATTTGGATGACATGCACGCAGATAATTATGATCTTCTTGTACCTTGTGTTTGCCTATGCTATCAAAGGAACCCTTTATCCTGCAATTGCAGTTCTTGGTATCTGCTACGGCGTGCAATTTTCCATAGTGATTCCCACTGTTTCGGAGCTTTTTGGTTTGAAAGACTTCGGTCTATTGAGCAACTTCATGGCTTTGGGGAACCCACTTGGTGCATTTCTTTTCTCTGCTCTTCTAGCAGGACATATATACGACAATGAGGCAGCAAAACAACACGGTGTAGGCCTCATTGCTTCAAGTGTTGCATGCATGGGTCCAAATTGTTTCAAGCTAACTTTTTTTACTCTGGCTGGTGTCTGTATTGCGGGAACCATCTCCAGCATTATCTTGACTATTAGAATTAAGCCCGTGTACCAAATGCTTTATGCTGGGGGTTCTTTTAAGCTACCTCAAACTTCAGGCCACTAA 1716 0.4295 MLRVKGGKRPPWVGLGAAVWVQIASGNGYCFPLYSHSLKSVLGFNQSQITLLGVANDIGENVGILPGLACNKFPPWLILFIGALFSFLGFGVLWLAITKTLDSLPFILLWFALAVATNSCAWLSTAILVTNMRNFPVSRGTVAGILKGYSGLSAAVFTQIYSVVFHNSSSKFLLFLAIGIPALCFSTMFLVRPCTPASGDDSAEKGHFLFIQGASVAMGLYILATTLLDNFIHIRDSVSYALLAVMILLLLAPLVIPIKMTLCPRKASSTEIPEEHVGSTDYLVQDGKDNVEPLLSSSSASGLGSFNDVVDGSAEVAMLLAEGEGAVRKKRRPKRGEDFKFTEALVKADYWLLFFVYFVGVGTGVTVLNNLAQIGIAQGMEDTTILLSLFSFFNFVGRLGGGVVSEYFVRTKTIPRTIWMTCTQIIMIFLYLVFAYAIKGTLYPAIAVLGICYGVQFSIVIPTVSELFGLKDFGLLSNFMALGNPLGAFLFSALLAGHIYDNEAAKQHGVGLIASSVACMGPNCFKLTFFTLAGVCIAGTISSIILTIRIKPVYQMLYAGGSFKLPQTSGH 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01003 571 Pfam Nodulin-like 11 258 IPR010658 -
Gma17g01003 571 SUPERFAMILY MFS general substrate transporter 11 195 IPR036259 -
Gma17g01003 571 CDD MFS_Mch1p_like 10 540 - -
Gma17g01003 571 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 2 569 - -
Gma17g01003 571 SUPERFAMILY MFS general substrate transporter 217 552 IPR036259 -
Gma17g01003 571 PANTHER NODULIN-LIKE/MFS TRANSPORTER 2 569 - -
Gma17g01003 571 Gene3D MFS general substrate transporter like domains 348 554 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01003 Gma-Chr17 8569708 8572871 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01003 2 571 Nodulin-like Gene Family AT1G80530 56.294 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01003 - - gmx:100787328 1075.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01003 17 8569708 8572871 Gma17g01003 17 8569708 8572871 ECH
Gma17g01003 17 8569708 8572871 Gma13g01447 13 29213258 29224467 GST
Gma17g01003 17 8569708 8572871 Gma15g01885 15 24134641 24138498 PCT
Gma17g01003 17 8569708 8572871 Gma09g00853 09 12602372 12606182 PCT
Gma15g01885 15 24134641 24138498 Gma17g01003 17 8569708 8572871 PCT
Gma09g00853 09 12602372 12606182 Gma17g01003 17 8569708 8572871 PCT