Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00987 ATGGCGTTTGATCAAAATTCCATTCCGTTGAACGCGGCCTCGGCGGTGGCCGAGGAGCCGCTGATTTCTCCGGCCACCGTCACGCCGCCCACTCCGAATTCCGTCGGGGAGCTTTTCTACCCGCCCTCGGACTCCGCAACGTGGTGCGTCCACCCCATTGCGCATCATGCCGACGTCAGCCCCGCGGCGGCGCCGTTTGGGTCTAACTACGGCGGTTCCAGTTTCGGAAACCACCGCGTTGTGGCTGCTGGGAATGCTTTGAATTTGGGAAAGTTGTCAGCGTGTAATGGATTAGACAACAAGGCATGCAATGATGTGAATGGTTTTGGTGGTGTTAGGGGAAGCAGAGTGGTTGCAAATGTCGGTGATCACGGCGGCGGTAGCCACCACGAGGGAGGTGGCAGCAACGGCGGCGATGATTCGGCCTCCTCGGGGAGGAAGGTAAAGTTTCTGTGCAGTTTTGGCGGGAAGATATTGCCTAGGCCTAGTGATGGAATGTTGAGATATGTTGGGGGGCAAACAAGGATCATTAGTGTCAGGAGAGATGTGAGTTTCAATGATTTGGTGCAAAAAATGGTTGAGTCTTATGGTCAGGCTGTGGTCATCAAGTATCAGCTTCCTGAGGAGGATCTTGATACATTGGTTTCCGTGTCGTGCCACGATGATGTGGACAACATGATGGAGGAGTACGAGAAATTGGTTGAGAGGTCTCATGATGGTTCTGCCAAGTTGAGGGTTTTTCTGTTTTCTGCTTCCGAGAGTAGTGAATGTTCTTCTTCTTCTGGTGGGGTGCACTTTGGGGACTTGCAGGATACAGGACAGAAGTATTTTGATGCTGTGAATGGGATTGGTAATAGTACAGAGGGGATCAATAGGAAGGAGAGTGTTACAAGTGCTGCTTCAACCCAGAATTCCGATTTTAGTGGTGCTGAAACTCTTGATAGTTCAATTGTCAGTGGTGGGGTGCCCTTGTCATCACCTAAGGAGAATGTGTCAGCAGCTTCTTCTTCCGACACAACTGCAACAAATTTGGTGGTTTTGGAGGTCCCCGGTGCACCGGTTTACTCGGGTGGTGCTTCCGCGGTTTCATTGGCCATGCCTGTGGCTAAGACTAAGACTAGTCCAACCGCAACCCACAATCTTTATTTTCAGAATGAGGTAGAGTCAGAGAAGTCTGTGACTGTTACTTTATCCCAGAACCCATTTGGATTGCAGCCTTTTGTTGATGCTACTAGCCAGGAGGTTATGAATCATGCAGCAGATTATGTCCAGCTGCCTTCACAGATGGGCTTCACAAACCCTCAGCTTTTAGGAAAGACTGGCGGGCATGTCTTCGCGCAACAGCAGTTTCATGATAGTACTCACCGTTTAGCATTGCATCATCAGGTCATCCCTGCTGGGGTACAAATGACAGTGGCTCAACAACCATCTTCTCATGTTGGTGTAAGACCAAATGTTGTTCAACCGCAGCAGCAACATCTTTTGGATCAATACCATGATGAAAATACTTCAGGAGGGGTAAGGATTATCCAGCTTCCTGCTGAACGTAGCTACAACACATTCCAGGTTCCAATGAATCAAGTCCAACCCGTCATAGTTGGAGGCAATTATGGCTGGGTTCAGGTTCCTCCACAAGAGCGTGTTGTTATCTCTGATGGATTGTTACCTCAACAACAGGTAATGATCCCTGAGAAAATCCGAAGAGCTGAGGACTGTTCTATGTGTCAGAAAAAACTACCTCATGCACATTCAGATCCAGTAGTTCAGGATCAGCACGATACTCGTGGTGCAGGTTCTACTCCTGATTCAACCCCAAGTCATAATAGTTTCCCAATAGAGGACAATGTAAAAGCTCAAGCAACGAATAGGATTATGCCAATGGTGACTTCACCCTTGAAGGAAGGCATTGCTGAACAGGGGGCTAGGACCAGACCCAGGGTCCTTGGCAAATTGGAACCTCCTGATGGAGTACATCATACTGAGACCAGTGGGTTTCCTCATAATATTGAGCCACACACTGAAGGTGGGAGGAATTTTATACAAAAGCTAGAAGAATTGGATCATCCCAGGAACTCGTTTTTCCAGGAAAAGATTGGAATGAAAGGCAGAGAACAATCTCCAAACGACGAGCCCCTGGGAACAACACCATTGCCTTATCTAGATGATGTTGGCAACCACCACATGGTATCAGTTGAGAACTGGGTTAAACAGGATGTGCTTAATCATATACCTTTAGGTGAAGGAAAATCTATAAAAACTTCAGAGGGTATGCTTCAAGGATCTCAAAAGGAATATACTAATGAGCTTTCCAGGGTTGTTTCTAAATCAGATGCGATAGATAATTGGATTAGACAAGACCATCTAAAACCTGTTGATGCAAGGATGGACACCTTAAAGATACCCAATTCTGAAGTTTATGTAAGTAATGATTACTCTTTTCTGCCAGTTGATAAACCCAGTGGGAATGATAACTTAGATTACAGCACTCACCACTCTGTAGAGGAAGAGGTGATTCTGGATAACAACTTTGGCAGGTCTAAACTGAGAGTTGATGTAAATCAAAATAAGATGACAGGTGTGCTGCCTTGTTCTTCTATGGAAATTTCATACAGGAACAATTCCAGGCCAGGGGAATGCAATGAGGCCGCACAACCTCCATTTTGGGGCATTCCTGGCTCAAGTCCTCAATCGAATATTGGCAACCCCCACAAGGGTGATGCATCACCATCTTCACCATCCTTGTCTGTTAGGTTTGGAGATGTGCAGGATACTAGGAACTCACTTTTCAGCAATCAGGATCCCTGGAATATACAGCATGGTACCTTCTTTCCACCTTCTATACCTAGCAAAACTGCTTATAGTAAAGAAACCTATTCTTGTAACGATTCCTTTGATGGGAATTCGGGCAACTTTGGGGAACAAAGTTTAGAAGCACAGTTGGATGGTAGCCTCTACCAGTCATTCAAACAAAATTTAACTATAGAACATGTTAGGTCTGCCAAAGGGTCAGCAGAAGACCAACAACTTCAAGCTGTTGCGGAAAATGTAGCAGCTTCTGTTTTGCACTCAAGAACTCCTTCAAATTCTGACTTGCATTCCGGAGATGTTTCCTGTTGCGAAACCATTAAGTATGACAGTGTTCAAAACAATCTAATAGATGTCAAGTGCGGACATAAAGCTCAGGATGTCAAGAGCAAGCAACTGGAAAAGGCAAATTTTGGCTTTCCAGCATCAGGTGTTGGAAAACTACAGgttataaagaattgtgatctagaagaactgatagaactaggttctggtacctttgggaccgtatatcatggaaaatggaggggcaccgatgttgcaatcaagcggattactgataggtgttttgccggaaagccttcagagcaagagcgcatgAGAAGTGACTTCTGGAATGAGGCAATCAAACTTGCTGACTTGCACCACCCGAATGTGGTAGCTTTCTACGGTGTTGTGCTTGATGGCCCAGGAGGTTCTGTGGCAACAGTAACTGAGTATATGGTTAATGGTTCTTTAAGAAATGCCTTGCAGAAGACTGAGAGGAATCTTGACAAGCGCAAATGTCTTTTGATTGCAATGGACGTGGCCTTTGGCATGGAGTACCTGCATGGAAAAAACATTGTACACTTTGACTTGAAAAGTGATAACTTGCTTGTGAATATCCGAGATCCTCACCGCCCAATATGCAAGgttggcgacttgggtctgtccaaagtaaaatgtcagacactgatctctggtggtgtgagaggaactctaccatggatggctccagaactgctgaacggaagcagtagccttgtttcagagaaggttgatgttttttcatttggtattgtgatgtgggaactcttgactggagaggagccatatgctgacttgcactatggtgctatcatagGTGGTATTGTTAGCAACACTTTGCGCCCTCCTGTTCCCTCATCTTGCGATCCAGAATGGAGATTGTTGATGGAGAGGTGCTGGTCATCAGAGCCATCAGAGAGACCTACCTTCACTGAGATTGCCAATGAATTACGTTCTTTAGCGACCAAGGTATCCTATCCCAGAGGACAAAACTCTCCTAAAGGACAAAACCAACATCAGCAACACTCTCCATTGCATACTCAAGTCCACAAATGA 4167 0.4192 MAFDQNSIPLNAASAVAEEPLISPATVTPPTPNSVGELFYPPSDSATWCVHPIAHHADVSPAAAPFGSNYGGSSFGNHRVVAAGNALNLGKLSACNGLDNKACNDVNGFGGVRGSRVVANVGDHGGGSHHEGGGSNGGDDSASSGRKVKFLCSFGGKILPRPSDGMLRYVGGQTRIISVRRDVSFNDLVQKMVESYGQAVVIKYQLPEEDLDTLVSVSCHDDVDNMMEEYEKLVERSHDGSAKLRVFLFSASESSECSSSSGGVHFGDLQDTGQKYFDAVNGIGNSTEGINRKESVTSAASTQNSDFSGAETLDSSIVSGGVPLSSPKENVSAASSSDTTATNLVVLEVPGAPVYSGGASAVSLAMPVAKTKTSPTATHNLYFQNEVESEKSVTVTLSQNPFGLQPFVDATSQEVMNHAADYVQLPSQMGFTNPQLLGKTGGHVFAQQQFHDSTHRLALHHQVIPAGVQMTVAQQPSSHVGVRPNVVQPQQQHLLDQYHDENTSGGVRIIQLPAERSYNTFQVPMNQVQPVIVGGNYGWVQVPPQERVVISDGLLPQQQVMIPEKIRRAEDCSMCQKKLPHAHSDPVVQDQHDTRGAGSTPDSTPSHNSFPIEDNVKAQATNRIMPMVTSPLKEGIAEQGARTRPRVLGKLEPPDGVHHTETSGFPHNIEPHTEGGRNFIQKLEELDHPRNSFFQEKIGMKGREQSPNDEPLGTTPLPYLDDVGNHHMVSVENWVKQDVLNHIPLGEGKSIKTSEGMLQGSQKEYTNELSRVVSKSDAIDNWIRQDHLKPVDARMDTLKIPNSEVYVSNDYSFLPVDKPSGNDNLDYSTHHSVEEEVILDNNFGRSKLRVDVNQNKMTGVLPCSSMEISYRNNSRPGECNEAAQPPFWGIPGSSPQSNIGNPHKGDASPSSPSLSVRFGDVQDTRNSLFSNQDPWNIQHGTFFPPSIPSKTAYSKETYSCNDSFDGNSGNFGEQSLEAQLDGSLYQSFKQNLTIEHVRSAKGSAEDQQLQAVAENVAASVLHSRTPSNSDLHSGDVSCCETIKYDSVQNNLIDVKCGHKAQDVKSKQLEKANFGFPASGVGKLQVIKNCDLEELIELGSGTFGTVYHGKWRGTDVAIKRITDRCFAGKPSEQERMRSDFWNEAIKLADLHHPNVVAFYGVVLDGPGGSVATVTEYMVNGSLRNALQKTERNLDKRKCLLIAMDVAFGMEYLHGKNIVHFDLKSDNLLVNIRDPHRPICKVGDLGLSKVKCQTLISGGVRGTLPWMAPELLNGSSSLVSEKVDVFSFGIVMWELLTGEEPYADLHYGAIIGGIVSNTLRPPVPSSCDPEWRLLMERCWSSEPSERPTFTEIANELRSLATKVSYPRGQNSPKGQNQHQQHSPLHTQVHK 1388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00987 1388 Gene3D Phosphorylase Kinase; domain 1 1084 1178 - -
Gma17g00987 1388 MobiDBLite consensus disorder prediction 1361 1388 - -
Gma17g00987 1388 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1216 1228 IPR008271 GO:0004672|GO:0006468
Gma17g00987 1388 ProSiteProfiles Protein kinase domain profile. 1091 1357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g00987 1388 SUPERFAMILY CAD & PB1 domains 163 258 - -
Gma17g00987 1388 Pfam Protein tyrosine and serine/threonine kinase 1096 1354 IPR001245 GO:0004672|GO:0006468
Gma17g00987 1388 MobiDBLite consensus disorder prediction 1359 1388 - -
Gma17g00987 1388 SMART serkin_6 1091 1357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g00987 1388 SUPERFAMILY Protein kinase-like (PK-like) 1086 1353 IPR011009 -
Gma17g00987 1388 MobiDBLite consensus disorder prediction 653 672 - -
Gma17g00987 1388 MobiDBLite consensus disorder prediction 580 611 - -
Gma17g00987 1388 Gene3D Transferase(Phosphotransferase) domain 1 1179 1388 - -
Gma17g00987 1388 PANTHER SERINE-THREONINE PROTEIN KINASE 916 1361 - -
Gma17g00987 1388 PANTHER SERINE-THREONINE PROTEIN KINASE 114 905 - -
Gma17g00987 1388 PRINTS Tyrosine kinase catalytic domain signature 1173 1186 IPR001245 GO:0004672|GO:0006468
Gma17g00987 1388 PRINTS Tyrosine kinase catalytic domain signature 1210 1228 IPR001245 GO:0004672|GO:0006468
Gma17g00987 1388 PRINTS Tyrosine kinase catalytic domain signature 1281 1303 IPR001245 GO:0004672|GO:0006468
Gma17g00987 1388 PRINTS Tyrosine kinase catalytic domain signature 1325 1347 IPR001245 GO:0004672|GO:0006468
Gma17g00987 1388 CDD STKc_MAP3K-like 1097 1354 - -
Gma17g00987 1388 SMART PB1_new 162 251 IPR000270 GO:0005515
Gma17g00987 1388 Gene3D - 168 251 - -
Gma17g00987 1388 MobiDBLite consensus disorder prediction 593 611 - -
Gma17g00987 1388 ProSitePatterns Protein kinases ATP-binding region signature. 1097 1128 IPR017441 GO:0005524
Gma17g00987 1388 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 916 1361 - -
Gma17g00987 1388 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 114 905 - -
Gma17g00987 1388 CDD PB1_UP2 151 249 - -
Gma17g00987 1388 Pfam PB1 domain 167 250 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00987 Gma-Chr17 8418746 8426545 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00987 87 593 MAP Kinase Kinase Kinase AT3G46920 38.878 3.07e-78 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Gma17g00987 PK_Tyr_Ser-Thr 3.5e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00987 - - gmx:100819234 2758.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00987 17 8418746 8426545 Gma17g00987 17 8418746 8426545 ECH
Gma17g00987 17 8418746 8426545 Gma15g01916 15 25846426 25857378 PCT