Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00966 ATGGCGCTGTTCAGAAGGTTCTTCTACCGGAAGCCGCCGGATCGGCTTCTGGAGATTTCCGAGAGAGTTTATGTTTTTGATTGCTGCTTCTCACCGGATGTCTTGGAAGAAGATGAATACCGAGTTTATATGGGGGGGATTGTGGCTCAGCTACAGGATCACTTTCCAGATGCTTCTTTCATGGTATTCAATTTCCGAGAAGGGGAGAGACGCAGCCAAATTTCAGACATATTTTCTCAGTATGACATGACAGTTATGGAGTACCCTCGACAATATGAGGGTTGTCCCCTTCTGCCTTTAGAGATGATCCATCACTTCCTTCGATCAAGTGAAAGCTGGTTGTCTTTGGAGGGGCAACAGAATGTGCTTTTGATGCACTGTGAAAGGGGTGGTTGGCCCGTGCTGGCATTTATGCTAGCAGGTCTTCTGTTATACCGGAAACAGTACAGTGGGGATCAGAAGACTCTTGAAATGGTCTACAAGCAAGCTCCAAGAGAACTACTACACCTTTTATCTCCTTTGAATCCACAGCCTTCTCATTTAAGATATCTTCAGTATATTTCCAGGAGACATTTGGGTTCTGAGTGGCCACCATCAGAAACACCCTTATATTTGGATTGCCTGATTCTTAGAGTCCTTCCATTATTTGATGATGGAAAAGGTTGCCGGCCTGTTGTGCGTGTTTATGGTCAGGACCCTTCAATCCCTGCCAATAGAAGTTCAAAGCTACTTTTTTCAACTTCAATATCCAAAAAGCATGTTCGCCACTACGTACAGGCAGAGTGTATGCTCGTCAAAATTGACATCCGTTGTCGTGTTCAAGGGGATGTGGTTCTCGAGTGCATACATTTAAATGAAGATTTTGTTCGTGAGGATATGATGTTTAGAGTTATGTTTCATACTGCATTTGTGCGGTCAAATATTTTGATGCTGAACCGTGATGAAATTGATATTTTGTGGGAGGCAAAGGACCTATTTCCCAAGGACTTCAAAGCAGAGGTGCTTTTTTTGGACGCTGATGCTGTTATACCTGAACTAACCACAGTCATGGTGAGTGAAGATGCAAATGAGACTGAGAGTGCTGAGACAGAAAGTGCTTCACCAGAGGAATTCTATGAAGTAGAAGAGATTTTCAGCAATGTAATTGATGCACAGGAAGGTAAGACAGAATATGATTCTCAAGCTTTTCATGAAAATGCAGTGGATGTTGAAACTCATAAAGAGGTCTGGAGGCAAGAGTCAGATCCTCATACTTTTGAGGATTGTACACCCGATGACAGGATTCCCAAGCAGGTTGACAAGATGAATTCTGGTATTAATGCAGTGAAAGATATCTCCATTGATGATGTGCACTATAAATTTGGTGGGAGCATGGATTCAGATCCTCATGCAGTGAAGGACATTGCTGTGGATGATGGAGAAATGAAGTCAACTTCCACTACATTTGTTTCTGATATGGTGAAACCTCCTCTGGAAACAAAGGAAGTCACCATGGATGTGCACCCAGAATTAGCAGTTATGCAAAATGAATATGATGAAGATAAGGAATTAGACTCCAAGGCAGGGCACCATATGTCTGATTTGTCGGAACAAAAATCTGGTAAACTACTTCCATCTACTGCGAAGAAACAACCTACATCTAACTCAAAGCCAGTCGGAGATACAATTGCAGCAAAGCCAAAGATTAAACAGCAAGATGCCCATGGTTTTCAGGCAAAACAAGCTAAGCCAAATGCAGTAACTAGGTGGATTCCTTCTAACAAGGGTTCTTATACAAATTCAATGCATGTCTATTATCCACCATCAAGGAATAATAGTGCACCAGCTGCACTGACAAATTTCTCCTCCTCAAAGGAGAAAATGGAAGATGCCAAAACAAGATCTTTATCTGCTCCTGTTGTCTCTGCAGTTGTTTCTATTGACAAGATAAATGACCTAAAAAGCCGGAAGGTGGCCACTTCAAGATCTTCTGGCTATATAGCAGCAGAAGTAGATGAAAAATGTCCACCATCACCATTGCTGCCAATTAAAGAGACATCTTTTCAGTCAGATACTCAAGCCCAACAACAAAGTTCAGAGCAAGTGCTACAGcctcccccaccacctccccctccacctccccttccaTATCAAAGTAGAATCTCTTCACATGTTTTTGAATCCGTATCATTAAAGGATGATGTATCAGCTCAAGACTCTCCATCTCTGCTAGTATCACCATCTTCTTTGGGTGGAAAGGGGTCCACCATGGCGccaccaccacctccgccaccaccaccaccaccaccaccaccTTCAACTTTAATGCCATTTACGAAACAATCTGCAACTTCTCTTCCTTCCCCTCCACTCCCACCCCCACCCCCGCCCCCACCTCCAcCCTCATTTTTTGGGCTAAATAAAAGGAGCTTAGTTCCTTCCCCATCCCCTCCAGATCATAGTCTTTCTGTAGTGGATACTGTAGCGGCACCTTCACAGCCTCCTCCACCACCACCTCCAATGCCTCCTCCAAGGTATGAAGTTTCATCCATTCTTCCTCTAACACCATTAGCATCACTTCTTCCAAAGCATGGAATTCCATCAATTCCTCCTCCTCCTCCTCCTATTACCATGTTTCCTACAGCTTCAACAGATAGAACTCCACCCCCTCCTCCCCCACCACCTCCGTTTGCATCACATAAAGCTTCACCTCCACCAGCACCCCCACCTCCATCTCCATCTCTGCCTCCCCTTCTACCACCCTTAGCTAATTCATATATATATTTAGCTCCACCACCTGTACCTCCACCGCCACCTCCCCCTCCTTTTGCCCCACCTCCACCTCCACCACCCCTTCGTCCATCAAGTGGAGCTCCACCTCCCCCACCTCCTCCAATGTATGGAGCACCACCTCCACCACCACCACCTCCTAGTGGGAGAGGACCACCTCCTCCACCTCCTCCTGGTGGTCGAGCCCCACTTCTCCCACCTCCACCAccaccacctcctggtgggagaggaccacctcctccaccccctccaatgtatggagcaccacctccaccaccacctccgggtggtcaaggaccacctcctcctggtggtcgaggtcctcctcctccacctcctcctggtggtcgaggtcctcctcctccacctcctcccgttggtcgaggtcctcctcctccacctccccctggtgTTCCTGGTGCTCCTAGCCCTCCTGGGGGTGGACCCCCACCACCTCCGCCCTTAGGTGCAAAAGGTGCCAATGTTGGAGCTGATCCAAGAGGGAGGGGACGTGGGTATGCACGCCCTGCAGGAGGTGGTGCAATGGCACCCCGACGATCCTCCTTAAAGCCGTTGCATTGGAGCAAGGTTACGAGGGCATTACAAGGAAGTTTATGGGAAGAATTACAAAGACATGGAGAACCTCAAATTGCACCAGAGTTTGATGTTTCAGAGCTAGAGAAGCTTTTCTCTGCAAATGTTCCAAAACCTACCGATTCTGGCAAATCTGGAGGGCGGCGCAAGTCTGTTGGAGCTAAAACTGACAGAATCACCTTGGTTGATCTAAGGAGGGCTAATAATACTGAAATTATGCTCACCAAGGTTAAGATGCCACTTCCCGATATGATGGCTGCAGTACTAGCTTTGGATGAGTCAGTATTGGATGTTGATCAAGTGGAAAATCTCATTAAGTTTTGTCCTACCAAAGAGGAGATGGATCTTTTGAAGGGATACACTGGTGACAAGGAGATTTTGGGGAAGTGTGAACAGTTTTTTCTGGAGTTGATGAAGGTGCCAAGGGTGGAGTCAAAATTAAGAGTATTTGCATTCAAGATTCAGTTTGGTTCTCAGGTAACAGAATTTAAGAAGAGTTTAAACACTGTGAACTCTGCCTGTGAAGAGGTCCGGAATTCTGTTAAACTAAAGGAGATAATGAAGAAAATTCTTTATTTGGGTAATACATTGAATCAAGGAACGGCAAGGGGATCTGCAGTTGGATTCAAGTTGGATAGTCTTTTAAAGCTCACTGACACTCGTGCTTCTAACAGTAAAATGACACTGATGCATTATCTTTGCAAGGTCCTGGCTGATAAATCGCCCAGGCTCCTTGATTTCCACCTAGACCTTGTTAGCCTGGAAGCTTCCACTAAGATACAATTGAAGTCATTAGCAGAAGAGATGCAGGCAATCATCAAGGGATTAGAAAAGGTTAAACAAGAATTTGCTGCATCTGCAAATGATGGACCTGTCTCCGAAGTTTTCCATAAGACATTGAAAGAATTTATAGCTGTATCTGAGTCAGAGGTAGCATCTCTAACAAACCTATATTCTGTAGTGGGTAGAAGCGCTGATGCACTTGCACTATATTTTGGTGAGGATCCTGCTCGTTGCCCTATGGAGCAAGTTACCACAACCCTGCTAAATTTTATAAGGTTGTTTCGGAAAGCACATGAAGAGAATATCAAACAAGCAGAGTTAGAGAAGAAGAAAGCTGAGAAAGAGGCTGAAATGGAGAAGGCAAAGGGCATTAACTTGACAAAGAAGGGGGCAAAAGATAGTTGA 4551 0.4173 MALFRRFFYRKPPDRLLEISERVYVFDCCFSPDVLEEDEYRVYMGGIVAQLQDHFPDASFMVFNFREGERRSQISDIFSQYDMTVMEYPRQYEGCPLLPLEMIHHFLRSSESWLSLEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYSGDQKTLEMVYKQAPRELLHLLSPLNPQPSHLRYLQYISRRHLGSEWPPSETPLYLDCLILRVLPLFDDGKGCRPVVRVYGQDPSIPANRSSKLLFSTSISKKHVRHYVQAECMLVKIDIRCRVQGDVVLECIHLNEDFVREDMMFRVMFHTAFVRSNILMLNRDEIDILWEAKDLFPKDFKAEVLFLDADAVIPELTTVMVSEDANETESAETESASPEEFYEVEEIFSNVIDAQEGKTEYDSQAFHENAVDVETHKEVWRQESDPHTFEDCTPDDRIPKQVDKMNSGINAVKDISIDDVHYKFGGSMDSDPHAVKDIAVDDGEMKSTSTTFVSDMVKPPLETKEVTMDVHPELAVMQNEYDEDKELDSKAGHHMSDLSEQKSGKLLPSTAKKQPTSNSKPVGDTIAAKPKIKQQDAHGFQAKQAKPNAVTRWIPSNKGSYTNSMHVYYPPSRNNSAPAALTNFSSSKEKMEDAKTRSLSAPVVSAVVSIDKINDLKSRKVATSRSSGYIAAEVDEKCPPSPLLPIKETSFQSDTQAQQQSSEQVLQPPPPPPPPPPLPYQSRISSHVFESVSLKDDVSAQDSPSLLVSPSSLGGKGSTMAPPPPPPPPPPPPPPSTLMPFTKQSATSLPSPPLPPPPPPPPPPSFFGLNKRSLVPSPSPPDHSLSVVDTVAAPSQPPPPPPPMPPPRYEVSSILPLTPLASLLPKHGIPSIPPPPPPITMFPTASTDRTPPPPPPPPPFASHKASPPPAPPPPSPSLPPLLPPLANSYIYLAPPPVPPPPPPPPFAPPPPPPPLRPSSGAPPPPPPPMYGAPPPPPPPPSGRGPPPPPPPGGRAPLLPPPPPPPPGGRGPPPPPPPMYGAPPPPPPPGGQGPPPPGGRGPPPPPPPGGRGPPPPPPPVGRGPPPPPPPGVPGAPSPPGGGPPPPPPLGAKGANVGADPRGRGRGYARPAGGGAMAPRRSSLKPLHWSKVTRALQGSLWEELQRHGEPQIAPEFDVSELEKLFSANVPKPTDSGKSGGRRKSVGAKTDRITLVDLRRANNTEIMLTKVKMPLPDMMAAVLALDESVLDVDQVENLIKFCPTKEEMDLLKGYTGDKEILGKCEQFFLELMKVPRVESKLRVFAFKIQFGSQVTEFKKSLNTVNSACEEVRNSVKLKEIMKKILYLGNTLNQGTARGSAVGFKLDSLLKLTDTRASNSKMTLMHYLCKVLADKSPRLLDFHLDLVSLEASTKIQLKSLAEEMQAIIKGLEKVKQEFAASANDGPVSEVFHKTLKEFIAVSESEVASLTNLYSVVGRSADALALYFGEDPARCPMEQVTTTLLNFIRLFRKAHEENIKQAELEKKKAEKEAEMEKAKGINLTKKGAKDS 1516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00966 1516 MobiDBLite consensus disorder prediction 726 746 - -
Gma17g00966 1516 MobiDBLite consensus disorder prediction 651 1110 - -
Gma17g00966 1516 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 336 IPR035892 -
Gma17g00966 1516 Gene3D Formin, FH2 domain 1121 1514 IPR042201 -
Gma17g00966 1516 SMART PTEN_C2_2 198 338 IPR014020 -
Gma17g00966 1516 Pfam Formin Homology 2 Domain 1108 1476 IPR015425 -
Gma17g00966 1516 MobiDBLite consensus disorder prediction 676 694 - -
Gma17g00966 1516 MobiDBLite consensus disorder prediction 525 554 - -
Gma17g00966 1516 MobiDBLite consensus disorder prediction 532 553 - -
Gma17g00966 1516 Gene3D Protein tyrosine phosphatase superfamily 14 201 IPR029021 -
Gma17g00966 1516 MobiDBLite consensus disorder prediction 749 769 - -
Gma17g00966 1516 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1054 1496 - -
Gma17g00966 1516 MobiDBLite consensus disorder prediction 779 797 - -
Gma17g00966 1516 MobiDBLite consensus disorder prediction 695 711 - -
Gma17g00966 1516 Gene3D - 202 341 - -
Gma17g00966 1516 MobiDBLite consensus disorder prediction 858 1080 - -
Gma17g00966 1516 MobiDBLite consensus disorder prediction 1490 1516 - -
Gma17g00966 1516 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 13 188 IPR029021 -
Gma17g00966 1516 PANTHER FORMIN-J 1 976 - -
Gma17g00966 1516 PANTHER FORMIN-J 963 1509 - -
Gma17g00966 1516 Coils Coil 1477 1506 - -
Gma17g00966 1516 Coils Coil 1383 1403 - -
Gma17g00966 1516 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1102 1502 IPR015425 -
Gma17g00966 1516 MobiDBLite consensus disorder prediction 823 842 - -
Gma17g00966 1516 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Gma17g00966 1516 Pfam C2 domain of PTEN tumour-suppressor protein 199 336 IPR014020 -
Gma17g00966 1516 SMART it6_source 695 1516 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00966 Gma-Chr17 8214431 8226656 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00966 1 635 FH2 protein (formin) Gene Family AT5G07740 61.077 0.0 788
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00966 - - gmx:100815515 1604.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00966 17 8214431 8226656 Gma17g00966 17 8214431 8226656 ECH