Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gma17g00966 | ATGGCGCTGTTCAGAAGGTTCTTCTACCGGAAGCCGCCGGATCGGCTTCTGGAGATTTCCGAGAGAGTTTATGTTTTTGATTGCTGCTTCTCACCGGATGTCTTGGAAGAAGATGAATACCGAGTTTATATGGGGGGGATTGTGGCTCAGCTACAGGATCACTTTCCAGATGCTTCTTTCATGGTATTCAATTTCCGAGAAGGGGAGAGACGCAGCCAAATTTCAGACATATTTTCTCAGTATGACATGACAGTTATGGAGTACCCTCGACAATATGAGGGTTGTCCCCTTCTGCCTTTAGAGATGATCCATCACTTCCTTCGATCAAGTGAAAGCTGGTTGTCTTTGGAGGGGCAACAGAATGTGCTTTTGATGCACTGTGAAAGGGGTGGTTGGCCCGTGCTGGCATTTATGCTAGCAGGTCTTCTGTTATACCGGAAACAGTACAGTGGGGATCAGAAGACTCTTGAAATGGTCTACAAGCAAGCTCCAAGAGAACTACTACACCTTTTATCTCCTTTGAATCCACAGCCTTCTCATTTAAGATATCTTCAGTATATTTCCAGGAGACATTTGGGTTCTGAGTGGCCACCATCAGAAACACCCTTATATTTGGATTGCCTGATTCTTAGAGTCCTTCCATTATTTGATGATGGAAAAGGTTGCCGGCCTGTTGTGCGTGTTTATGGTCAGGACCCTTCAATCCCTGCCAATAGAAGTTCAAAGCTACTTTTTTCAACTTCAATATCCAAAAAGCATGTTCGCCACTACGTACAGGCAGAGTGTATGCTCGTCAAAATTGACATCCGTTGTCGTGTTCAAGGGGATGTGGTTCTCGAGTGCATACATTTAAATGAAGATTTTGTTCGTGAGGATATGATGTTTAGAGTTATGTTTCATACTGCATTTGTGCGGTCAAATATTTTGATGCTGAACCGTGATGAAATTGATATTTTGTGGGAGGCAAAGGACCTATTTCCCAAGGACTTCAAAGCAGAGGTGCTTTTTTTGGACGCTGATGCTGTTATACCTGAACTAACCACAGTCATGGTGAGTGAAGATGCAAATGAGACTGAGAGTGCTGAGACAGAAAGTGCTTCACCAGAGGAATTCTATGAAGTAGAAGAGATTTTCAGCAATGTAATTGATGCACAGGAAGGTAAGACAGAATATGATTCTCAAGCTTTTCATGAAAATGCAGTGGATGTTGAAACTCATAAAGAGGTCTGGAGGCAAGAGTCAGATCCTCATACTTTTGAGGATTGTACACCCGATGACAGGATTCCCAAGCAGGTTGACAAGATGAATTCTGGTATTAATGCAGTGAAAGATATCTCCATTGATGATGTGCACTATAAATTTGGTGGGAGCATGGATTCAGATCCTCATGCAGTGAAGGACATTGCTGTGGATGATGGAGAAATGAAGTCAACTTCCACTACATTTGTTTCTGATATGGTGAAACCTCCTCTGGAAACAAAGGAAGTCACCATGGATGTGCACCCAGAATTAGCAGTTATGCAAAATGAATATGATGAAGATAAGGAATTAGACTCCAAGGCAGGGCACCATATGTCTGATTTGTCGGAACAAAAATCTGGTAAACTACTTCCATCTACTGCGAAGAAACAACCTACATCTAACTCAAAGCCAGTCGGAGATACAATTGCAGCAAAGCCAAAGATTAAACAGCAAGATGCCCATGGTTTTCAGGCAAAACAAGCTAAGCCAAATGCAGTAACTAGGTGGATTCCTTCTAACAAGGGTTCTTATACAAATTCAATGCATGTCTATTATCCACCATCAAGGAATAATAGTGCACCAGCTGCACTGACAAATTTCTCCTCCTCAAAGGAGAAAATGGAAGATGCCAAAACAAGATCTTTATCTGCTCCTGTTGTCTCTGCAGTTGTTTCTATTGACAAGATAAATGACCTAAAAAGCCGGAAGGTGGCCACTTCAAGATCTTCTGGCTATATAGCAGCAGAAGTAGATGAAAAATGTCCACCATCACCATTGCTGCCAATTAAAGAGACATCTTTTCAGTCAGATACTCAAGCCCAACAACAAAGTTCAGAGCAAGTGCTACAGcctcccccaccacctccccctccacctccccttccaTATCAAAGTAGAATCTCTTCACATGTTTTTGAATCCGTATCATTAAAGGATGATGTATCAGCTCAAGACTCTCCATCTCTGCTAGTATCACCATCTTCTTTGGGTGGAAAGGGGTCCACCATGGCGccaccaccacctccgccaccaccaccaccaccaccaccaccTTCAACTTTAATGCCATTTACGAAACAATCTGCAACTTCTCTTCCTTCCCCTCCACTCCCACCCCCACCCCCGCCCCCACCTCCAcCCTCATTTTTTGGGCTAAATAAAAGGAGCTTAGTTCCTTCCCCATCCCCTCCAGATCATAGTCTTTCTGTAGTGGATACTGTAGCGGCACCTTCACAGCCTCCTCCACCACCACCTCCAATGCCTCCTCCAAGGTATGAAGTTTCATCCATTCTTCCTCTAACACCATTAGCATCACTTCTTCCAAAGCATGGAATTCCATCAATTCCTCCTCCTCCTCCTCCTATTACCATGTTTCCTACAGCTTCAACAGATAGAACTCCACCCCCTCCTCCCCCACCACCTCCGTTTGCATCACATAAAGCTTCACCTCCACCAGCACCCCCACCTCCATCTCCATCTCTGCCTCCCCTTCTACCACCCTTAGCTAATTCATATATATATTTAGCTCCACCACCTGTACCTCCACCGCCACCTCCCCCTCCTTTTGCCCCACCTCCACCTCCACCACCCCTTCGTCCATCAAGTGGAGCTCCACCTCCCCCACCTCCTCCAATGTATGGAGCACCACCTCCACCACCACCACCTCCTAGTGGGAGAGGACCACCTCCTCCACCTCCTCCTGGTGGTCGAGCCCCACTTCTCCCACCTCCACCAccaccacctcctggtgggagaggaccacctcctccaccccctccaatgtatggagcaccacctccaccaccacctccgggtggtcaaggaccacctcctcctggtggtcgaggtcctcctcctccacctcctcctggtggtcgaggtcctcctcctccacctcctcccgttggtcgaggtcctcctcctccacctccccctggtgTTCCTGGTGCTCCTAGCCCTCCTGGGGGTGGACCCCCACCACCTCCGCCCTTAGGTGCAAAAGGTGCCAATGTTGGAGCTGATCCAAGAGGGAGGGGACGTGGGTATGCACGCCCTGCAGGAGGTGGTGCAATGGCACCCCGACGATCCTCCTTAAAGCCGTTGCATTGGAGCAAGGTTACGAGGGCATTACAAGGAAGTTTATGGGAAGAATTACAAAGACATGGAGAACCTCAAATTGCACCAGAGTTTGATGTTTCAGAGCTAGAGAAGCTTTTCTCTGCAAATGTTCCAAAACCTACCGATTCTGGCAAATCTGGAGGGCGGCGCAAGTCTGTTGGAGCTAAAACTGACAGAATCACCTTGGTTGATCTAAGGAGGGCTAATAATACTGAAATTATGCTCACCAAGGTTAAGATGCCACTTCCCGATATGATGGCTGCAGTACTAGCTTTGGATGAGTCAGTATTGGATGTTGATCAAGTGGAAAATCTCATTAAGTTTTGTCCTACCAAAGAGGAGATGGATCTTTTGAAGGGATACACTGGTGACAAGGAGATTTTGGGGAAGTGTGAACAGTTTTTTCTGGAGTTGATGAAGGTGCCAAGGGTGGAGTCAAAATTAAGAGTATTTGCATTCAAGATTCAGTTTGGTTCTCAGGTAACAGAATTTAAGAAGAGTTTAAACACTGTGAACTCTGCCTGTGAAGAGGTCCGGAATTCTGTTAAACTAAAGGAGATAATGAAGAAAATTCTTTATTTGGGTAATACATTGAATCAAGGAACGGCAAGGGGATCTGCAGTTGGATTCAAGTTGGATAGTCTTTTAAAGCTCACTGACACTCGTGCTTCTAACAGTAAAATGACACTGATGCATTATCTTTGCAAGGTCCTGGCTGATAAATCGCCCAGGCTCCTTGATTTCCACCTAGACCTTGTTAGCCTGGAAGCTTCCACTAAGATACAATTGAAGTCATTAGCAGAAGAGATGCAGGCAATCATCAAGGGATTAGAAAAGGTTAAACAAGAATTTGCTGCATCTGCAAATGATGGACCTGTCTCCGAAGTTTTCCATAAGACATTGAAAGAATTTATAGCTGTATCTGAGTCAGAGGTAGCATCTCTAACAAACCTATATTCTGTAGTGGGTAGAAGCGCTGATGCACTTGCACTATATTTTGGTGAGGATCCTGCTCGTTGCCCTATGGAGCAAGTTACCACAACCCTGCTAAATTTTATAAGGTTGTTTCGGAAAGCACATGAAGAGAATATCAAACAAGCAGAGTTAGAGAAGAAGAAAGCTGAGAAAGAGGCTGAAATGGAGAAGGCAAAGGGCATTAACTTGACAAAGAAGGGGGCAAAAGATAGTTGA | 4551 | 0.4173 | MALFRRFFYRKPPDRLLEISERVYVFDCCFSPDVLEEDEYRVYMGGIVAQLQDHFPDASFMVFNFREGERRSQISDIFSQYDMTVMEYPRQYEGCPLLPLEMIHHFLRSSESWLSLEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYSGDQKTLEMVYKQAPRELLHLLSPLNPQPSHLRYLQYISRRHLGSEWPPSETPLYLDCLILRVLPLFDDGKGCRPVVRVYGQDPSIPANRSSKLLFSTSISKKHVRHYVQAECMLVKIDIRCRVQGDVVLECIHLNEDFVREDMMFRVMFHTAFVRSNILMLNRDEIDILWEAKDLFPKDFKAEVLFLDADAVIPELTTVMVSEDANETESAETESASPEEFYEVEEIFSNVIDAQEGKTEYDSQAFHENAVDVETHKEVWRQESDPHTFEDCTPDDRIPKQVDKMNSGINAVKDISIDDVHYKFGGSMDSDPHAVKDIAVDDGEMKSTSTTFVSDMVKPPLETKEVTMDVHPELAVMQNEYDEDKELDSKAGHHMSDLSEQKSGKLLPSTAKKQPTSNSKPVGDTIAAKPKIKQQDAHGFQAKQAKPNAVTRWIPSNKGSYTNSMHVYYPPSRNNSAPAALTNFSSSKEKMEDAKTRSLSAPVVSAVVSIDKINDLKSRKVATSRSSGYIAAEVDEKCPPSPLLPIKETSFQSDTQAQQQSSEQVLQPPPPPPPPPPLPYQSRISSHVFESVSLKDDVSAQDSPSLLVSPSSLGGKGSTMAPPPPPPPPPPPPPPSTLMPFTKQSATSLPSPPLPPPPPPPPPPSFFGLNKRSLVPSPSPPDHSLSVVDTVAAPSQPPPPPPPMPPPRYEVSSILPLTPLASLLPKHGIPSIPPPPPPITMFPTASTDRTPPPPPPPPPFASHKASPPPAPPPPSPSLPPLLPPLANSYIYLAPPPVPPPPPPPPFAPPPPPPPLRPSSGAPPPPPPPMYGAPPPPPPPPSGRGPPPPPPPGGRAPLLPPPPPPPPGGRGPPPPPPPMYGAPPPPPPPGGQGPPPPGGRGPPPPPPPGGRGPPPPPPPVGRGPPPPPPPGVPGAPSPPGGGPPPPPPLGAKGANVGADPRGRGRGYARPAGGGAMAPRRSSLKPLHWSKVTRALQGSLWEELQRHGEPQIAPEFDVSELEKLFSANVPKPTDSGKSGGRRKSVGAKTDRITLVDLRRANNTEIMLTKVKMPLPDMMAAVLALDESVLDVDQVENLIKFCPTKEEMDLLKGYTGDKEILGKCEQFFLELMKVPRVESKLRVFAFKIQFGSQVTEFKKSLNTVNSACEEVRNSVKLKEIMKKILYLGNTLNQGTARGSAVGFKLDSLLKLTDTRASNSKMTLMHYLCKVLADKSPRLLDFHLDLVSLEASTKIQLKSLAEEMQAIIKGLEKVKQEFAASANDGPVSEVFHKTLKEFIAVSESEVASLTNLYSVVGRSADALALYFGEDPARCPMEQVTTTLLNFIRLFRKAHEENIKQAELEKKKAEKEAEMEKAKGINLTKKGAKDS | 1516 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gma17g00966 | 1516 | MobiDBLite | consensus disorder prediction | 726 | 746 | - | - | |
| Gma17g00966 | 1516 | MobiDBLite | consensus disorder prediction | 651 | 1110 | - | - | |
| Gma17g00966 | 1516 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 200 | 336 | IPR035892 | - | |
| Gma17g00966 | 1516 | Gene3D | Formin, FH2 domain | 1121 | 1514 | IPR042201 | - | |
| Gma17g00966 | 1516 | SMART | PTEN_C2_2 | 198 | 338 | IPR014020 | - | |
| Gma17g00966 | 1516 | Pfam | Formin Homology 2 Domain | 1108 | 1476 | IPR015425 | - | |
| Gma17g00966 | 1516 | MobiDBLite | consensus disorder prediction | 676 | 694 | - | - | |
| Gma17g00966 | 1516 | MobiDBLite | consensus disorder prediction | 525 | 554 | - | - | |
| Gma17g00966 | 1516 | MobiDBLite | consensus disorder prediction | 532 | 553 | - | - | |
| Gma17g00966 | 1516 | Gene3D | Protein tyrosine phosphatase superfamily | 14 | 201 | IPR029021 | - |
Showing 1 to 10 of 27 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gma17g00966 | - | - | gmx:100815515 | 1604.34 |
Showing 1 to 1 of 1 entries
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Gma17g00966 | 17 | 8214431 | 8226656 | Gma17g00966 | 17 | 8214431 | 8226656 | ECH |
Showing 1 to 1 of 1 entries