Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00957 ATGGAAACTGGAATAATCCAGGGACCTTGGGGATTTCGCTCTCTATCCAAATTCGTTTTATGCACCATTTCTGGGGCCCTTACCGTGTGTTTTGCCCTTGCTGGGGCCCTGACAGGAGCTATAGCTGGTGCTCTAGCAGCTAAGGCCACTAAGAGTGGTCTTCTCCGGGGAGTTTCATTGGGTGCCATTGCCGGCTCTATACTCTCTGTGGAGGTGTTGGAAGCTTCCCGTGCCTATTGGTGTATGGAGCAAACTGGCTCACGGAGTGCATCATCTATGGCAGATTTCATAGAGGAACTTGTTCGTGGGAGGCTTGTTGAGGAATCCCTTACACCTGCTATTTTAACTGCTTACAATTTGCAGTTTGAGCAGGTTGGCATTGCGAATACAGGCTATGTTGAGACTCATGATGTTCATGGCTTAGTTGCACCCAGAGGACTGTCAGGAGATTCATTGAAGAGGTTACCCCACCATATGATCTCAAAGGCAGAGAATACCTGCTGTGCAATATGTTTGCAGGATATTGAAGTAGGGGAAATTGCAAGAAGCTTACCTCGCTGTCACCATACATTTCACTTGATATGTGTGGACAAATGGCTTGTCAAGAATGATTCTTGTCCTGTCTGCAGACAGAATGTATAA 642 0.4688 METGIIQGPWGFRSLSKFVLCTISGALTVCFALAGALTGAIAGALAAKATKSGLLRGVSLGAIAGSILSVEVLEASRAYWCMEQTGSRSASSMADFIEELVRGRLVEESLTPAILTAYNLQFEQVGIANTGYVETHDVHGLVAPRGLSGDSLKRLPHHMISKAENTCCAICLQDIEVGEIARSLPRCHHTFHLICVDKWLVKNDSCPVCRQNV 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00957 213 ProSiteProfiles Zinc finger RING-type profile. 168 210 IPR001841 -
Gma17g00957 213 SUPERFAMILY RING/U-box 162 213 - -
Gma17g00957 213 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 11 212 - -
Gma17g00957 213 SMART ring_2 168 209 IPR001841 -
Gma17g00957 213 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 134 213 IPR013083 -
Gma17g00957 213 Pfam Ring finger domain 168 210 IPR001841 -
Gma17g00957 213 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 11 212 IPR044523 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00957 Gma-Chr17 8163139 8166972 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00957 14 213 C3H Transcription Factor Family AT1G74410 54.902 1.15e-72 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00957 - - gmx:100306666 404.445
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00957 17 8163139 8166972 Gma17g00957 17 8163139 8166972 ECH
Gma17g00957 17 8163139 8166972 Gma05g00248 05 2236525 2239991 GST