Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00934 ATGGAGGGAGGCGACGATCTCCAGCACCACCATCGTCAGAACAACTTCCCATTCCAGCTACTTGAGAAGAAAGAAGACCAAGAAACCGCGTCATGCTCCACCTCCTCCCCTTACCCTTCCCTAGCAATCTCCGCGGAACCGAGCATGTCCAATTCCACCCGATCCAACCAGCTCTCGGCGGCCGAGGCTTCGGCGGAGGCGGCGAACAGCAAAAAGCCTCCGCCGAAGCGCACCTCGACGAAGGACCGGCACACGAAGGTGGACGGGCGCGGGCGGCGCATCCGAATGCCTGCCCTCTGCGCCGCCCGCGTCTTCCAGCTGACCCGCGAGCTGGGCCACAAGTCGGACGGCGAAACCATCGAGTGGCTCCTCCAGCAGGCGGAGCCCGCGGTGATCGCCGCCACTGGCACCGGCACCATCCCCGCCAACTTCACCTCCCTGAACATCTCCCTCCGCAGCTCCGGCTCCTCCATGTCCGTCCCCTCCCAGCTCCGGTCCTCCTACTTCAACCCCAACTTCTCCCTCCAACAACAACAACGTAGAACCTTCTTCCCCGGCATAGCCCTTTCCTCCGAACACAACACCACCACCAACAACACATCAACACTTGTCAATTTCCAACAATCCAACAACCTCACCACCACCATGCTGCAGCAGCAGGCCAAGCCGGAGCTTCGCGACGGCCTACCATCTTCCTTAGACATTTCAGACACAAGAACAAACACAGAAGACCCAAGCCGCAAAAGAAGACCAACTACAGAACAACAAGACCTATCCCCCACCACGCAGCAGCAGCACCACCAAATGGGAAGCTATCTCCTTCAATCTAGTGCAGGCGCTATTCCAGCGAGCCACGCCGCCAACATATGGATGGTGGCGAATTCAAACTCGAATCAGGTCATGAGTGGCGATCCCATGTGGACCTTCCCACCGGTTAACAACAGTGCTTTGTATCGGGGCACCATGTCCAGCGGCTTGCATTTCATGAATTTTCCAACGCCCATGGCGTTGTTGCCGAGTCAGCAACTAGGTTCTGCTGGGAATATTGGTGCTGTTCATGGAGGAAGCAGTAATAATAATAATCACAATAATAATATGAATGAAGCACATTTGAGTATGCTTGCAGGGCTTAGTCCTTATCGACCTGTTATTGGCGTTTCGGAATCTCAGCCGAGTGGCTCGCAATCGCATCGTGGAGGTGCCGATGATCGACATGATAATAGCTCCAGTCACCACTCCTAG 1242 0.5604 MEGGDDLQHHHRQNNFPFQLLEKKEDQETASCSTSSPYPSLAISAEPSMSNSTRSNQLSAAEASAEAANSKKPPPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSSMSVPSQLRSSYFNPNFSLQQQQRRTFFPGIALSSEHNTTTNNTSTLVNFQQSNNLTTTMLQQQAKPELRDGLPSSLDISDTRTNTEDPSRKRRPTTEQQDLSPTTQQQHHQMGSYLLQSSAGAIPASHAANIWMVANSNSNQVMSGDPMWTFPPVNNSALYRGTMSSGLHFMNFPTPMALLPSQQLGSAGNIGAVHGGSSNNNNHNNNMNEAHLSMLAGLSPYRPVIGVSESQPSGSQSHRGGADDRHDNSSSHHS 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00934 413 MobiDBLite consensus disorder prediction 398 413 - -
Gma17g00934 413 PANTHER TRANSCRIPTION FACTOR TCP14-LIKE 7 412 - -
Gma17g00934 413 MobiDBLite consensus disorder prediction 383 413 - -
Gma17g00934 413 MobiDBLite consensus disorder prediction 218 269 - -
Gma17g00934 413 MobiDBLite consensus disorder prediction 240 254 - -
Gma17g00934 413 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 7 412 IPR005333 GO:0003700
Gma17g00934 413 MobiDBLite consensus disorder prediction 30 64 - -
Gma17g00934 413 MobiDBLite consensus disorder prediction 1 92 - -
Gma17g00934 413 ProSiteProfiles TCP domain profile. 80 134 IPR017887 -
Gma17g00934 413 MobiDBLite consensus disorder prediction 255 269 - -
Gma17g00934 413 Pfam TCP family transcription factor 78 255 IPR017887 -
Gma17g00934 413 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00934 Gma-Chr17 7975100 7976561 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00934 52 342 TCP Transcription Factor Family AT3G47620 50.442 2.38e-62 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gma17g00934 TCP 1.3e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00934 - - gmx:100809776 740.725
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00267 05 2431464 2433175 Gma17g00934 17 7975100 7976561 ECH
Gma17g00934 17 7975100 7976561 Gma17g00934 17 7975100 7976561 ECH
Gma17g00934 17 7975100 7976561 Gma05g00267 05 2431464 2433175 GST
Gma01g00418 01 5321213 5322475 Gma17g00934 17 7975100 7976561 PCT
Gma02g00969 02 10320039 10322002 Gma17g00934 17 7975100 7976561 PCT