Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00926 ATGGCAAATCCTGTTCCCGCGAGCTTCTGGACTCAAGCAAACGCGCTTCTTCGCAAGAATCTAACCTTCCACAAACGGAACGTGAAAACGAACGCTCAGCTGGTACTGTTCCCGCTGATCCTCTTCTTGCTGCTTTTCGCGCTCCAACGCCTCATCGATACGCAATTCGGTGGCTCCATCTTCAAATGCGGCTGCGTCTGCGCCAACAACACAACAACAACCACCCAAGAACAACACTCTCACTGCCCTGACTCAGAAAAAGTTTGTGGGATCCACTATTCCGATTCCATTCAAGCTGCCTTCTGCGCCATTCCCAACCCCATCGAGTGGCCACCGCTCCTGCAGCTTCCGGCTCCGCCCAACCGCGCCGCGCGAACCCCTTCTCTTCCCCTTCCGGATTTTCCCGATGCCTCGTGCCGGAGAACCGACTCGTGTCCTCTTACTCTGCTCTTCACCGCACTCAATCACTCCTTTGCGGAAACTGTGTCTGCTAATATGTTTGGGAGTGCCTTGAACGTAAGTGATTTCGGTAGTGATTTCTTGGCTAGTTTGGCCATGAATGTACTGGGATCTGAATCAACGCCTGGGAGTAACAATTTTATTGAACCTGCTTTCTCTTCTGGTCTCCCCATTTATTATCTACAAACAAAGTGCACAGACACAGAGAAATCTGGACTCTCCTTTCCCTCGCTGCCGGCAGCAGACAATGAGATCAAGTGTGATCAGGCTCTAAATTTATGGCGTAATAGTTCTTCTGAGATCAACAGTGAACTATATAAAGGTTATCAAAGAGGTAACTCAGATGGACAAGTCAATGAGATAGTTTCAGCTTTTGATTTTCTAAATTCGAACGGGAATGGATATAATGTCTGTATATGGTACAACTCAACCTATGAGCGACACACAGGATTTGGTCCTAGTAGTGTGTTATTGCGGATTCCTCGCTCTATAAATCTGTTATCAAATTCCTACTTGCAGTTTCTGCTTGGACCTGGAACCAAAATGTTATTTGAGTTTGTAAAGGAAATGCCAAAACCTGAGACCAGCTTTAACCTTGAGTTATCTTCTCTTCTGGGCACTATGTTCTTTACATGGGTCATCCTGCAACTTTTTCCTGTTGTTCTGACATCACTAGTATATGAGAAGCAACAAAAATTAAGAATCATGATGAAAATGCATGGTCTTGGTGATGGGCCATATTGGATGATTTCATATGGTTATTTTCTTGCCATATCAGTAATCTACATGTTGTGTTTTGTGATATTTGGCTCACTCTTAGGTAAGAGTATAACCATTGCACTGTTTTCTCTTTTTGGGATTTTCTCATTTTCTTTAATACTGCTGACTTTATTTTCAGGATTAAAAATCTTCACAATCAATGACTACAGCATCCAATTTGTGTTTTATTTCATCTATATAAACTTACAAATTGCACTGGCATTTATGGTGGCTTCTATATTTTCAAATGTTAAGACTGCTACAGTAACTGCATATATTGGTGTCTTTGGAACCGGGTTATTAGCTGTCTTTCTTTTCCAATTCTTTGTTCAAAATACATCATTTCCAAGAGGGTGGATAATTGTTATGGAGTTTTATCCTGGGTTTGCTTTATATCGTGGGTTGTATGAGTTAGCACAATTTTCCTTTCAAGGGAGTAGTTCGGGGTCAGGTGGTATGAAATGGCAGAATCTGAGTGAAAGCACCAATGGCATGAAAGAGGTCTTAATTATCATGTTTGTTGAGTGGATAGTGATGCTTTTTGCTGCCTTCTACGTTGACCAAGTATTGTTGTCAGGAAGTAGGAAAAGTCCGCTTTTTTACTTGAAAGGATTTCAGAAAAGGCCTCCTTTCCAAAAGCTTGATGCCCAAATGCAGGGGTCAAAAGTATTCTCTCAAACGGAGAAACCAGATGTCATCCAAGAGAAGGAGAAGGTGGAGCAACTGCTACTTGAACCATCTATTAATCATACAATTGTATGTGATGATGTGAAAAAGGTCTATCCAGGGAGGGATGGAAATCCAGATAAATATGCAGTTAGAGGGTTGTTTCTTTTTGTGCCTCAAGGGGAATGCTTTGGTATGCTTGGTCCCAATGGAGCTGGGAAGACCTCTTTTATCAACATGATGATTGGTCTCACAAAGCCAACCTCTGGTAGGGCGTTTGTTCAAGGCTTGGACATAAGAACTCAAATGGATGAAATATATACTACCATGGGTGTATGCCCACAGCATGACTTGCTGTGGGAAAGCTTGACAGGTAGAGAGCACCTACTTTTTTATGGCAGACTTAAAAATCTTAAAGGCTCACTCTTGACACAAGCAGTAGAAGAATCTTTGATGAGTTTAAACCTTTTTCATGGAGGAGTTGCTGATAAACAAGTTGGAAAATACAGTGGAGGGATGAAGAGGAGGCTTAGTGTTGCAATTTCGTTGATTGGGGATCCTAGAGTTATTTACATGGATGAGCCAAGTTCCGGGTTAGACCCTGCCTCAAGAAAAAGCTTATGGAATGTTGTCAAGCGTGCAAAACAGAACCGTGCAATCATTCTCACCACACATTCCATGGAAGAGGCAGAAGCCTTATGTGATCGATTGGGAATATTTGTAAATGGTAGCTTGCAATGTGTAGGAAATGCAAAGGAGCTGAAAGAAAGATATGGAGGAACTTACGTGTTCACGATGACAACATCTTCGGATCATGAAAAAGATGTGGAGAACATGGTGCAGAAACTCACCCCAAATGCCAACAAGATATACCATCTCTCTGGTACTCAGAAGTTTGAGTTGCCAAAAGAGGATGTTAGAATAGCAGATGTATTCCAAGCTGTTGATGCTGCCAAGAGAAACTTCACCGTTTCTGCATGGGGTCTAGTTGACACCACATTGGAAGATGTCTTCATTAAGGTTGCGCGTGAGGCTCAGGCATTTGACACCTTGTCATAA 2943 0.4247 MANPVPASFWTQANALLRKNLTFHKRNVKTNAQLVLFPLILFLLLFALQRLIDTQFGGSIFKCGCVCANNTTTTTQEQHSHCPDSEKVCGIHYSDSIQAAFCAIPNPIEWPPLLQLPAPPNRAARTPSLPLPDFPDASCRRTDSCPLTLLFTALNHSFAETVSANMFGSALNVSDFGSDFLASLAMNVLGSESTPGSNNFIEPAFSSGLPIYYLQTKCTDTEKSGLSFPSLPAADNEIKCDQALNLWRNSSSEINSELYKGYQRGNSDGQVNEIVSAFDFLNSNGNGYNVCIWYNSTYERHTGFGPSSVLLRIPRSINLLSNSYLQFLLGPGTKMLFEFVKEMPKPETSFNLELSSLLGTMFFTWVILQLFPVVLTSLVYEKQQKLRIMMKMHGLGDGPYWMISYGYFLAISVIYMLCFVIFGSLLGKSITIALFSLFGIFSFSLILLTLFSGLKIFTINDYSIQFVFYFIYINLQIALAFMVASIFSNVKTATVTAYIGVFGTGLLAVFLFQFFVQNTSFPRGWIIVMEFYPGFALYRGLYELAQFSFQGSSSGSGGMKWQNLSESTNGMKEVLIIMFVEWIVMLFAAFYVDQVLLSGSRKSPLFYLKGFQKRPPFQKLDAQMQGSKVFSQTEKPDVIQEKEKVEQLLLEPSINHTIVCDDVKKVYPGRDGNPDKYAVRGLFLFVPQGECFGMLGPNGAGKTSFINMMIGLTKPTSGRAFVQGLDIRTQMDEIYTTMGVCPQHDLLWESLTGREHLLFYGRLKNLKGSLLTQAVEESLMSLNLFHGGVADKQVGKYSGGMKRRLSVAISLIGDPRVIYMDEPSSGLDPASRKSLWNVVKRAKQNRAIILTTHSMEEAEALCDRLGIFVNGSLQCVGNAKELKERYGGTYVFTMTTSSDHEKDVENMVQKLTPNANKIYHLSGTQKFELPKEDVRIADVFQAVDAAKRNFTVSAWGLVDTTLEDVFIKVAREAQAFDTLS 980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00926 980 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 649 896 IPR027417 -
Gma17g00926 980 ProSitePatterns ABC transporters family signature. 797 811 IPR017871 GO:0005524
Gma17g00926 980 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 453 980 IPR026082 GO:0016021|GO:0055085|GO:0140359
Gma17g00926 980 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 6 448 IPR026082 GO:0016021|GO:0055085|GO:0140359
Gma17g00926 980 PANTHER ABC TRANSPORTER A FAMILY PROTEIN 453 980 - -
Gma17g00926 980 PANTHER ABC TRANSPORTER A FAMILY PROTEIN 6 448 - -
Gma17g00926 980 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 658 895 IPR003439 GO:0005524
Gma17g00926 980 Pfam ABC transporter 685 824 IPR003439 GO:0005524
Gma17g00926 980 Gene3D - 650 925 IPR027417 -
Gma17g00926 980 SMART AAA_5 688 872 IPR003593 -
Gma17g00926 980 CDD ABC_subfamily_A 662 883 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00926 Gma-Chr17 7906070 7914850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00926 634 882 Calmodulin-binding Proteins AT2G36910 24.016 2.02e-14 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00926 - - gmx:100806425 1861.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00926 17 7906070 7914850 Gma17g00926 17 7906070 7914850 ECH
Gma17g00926 17 7906070 7914850 Gma05g00277 05 2493617 2504090 GST