Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00925 ATGTCTCACACTCGACCACACTATTCCTGCCAGCGTGGCTCCCATACCTCGCACCACGCAACCCACCTTCGCAAAACGCCACGCGCTTCCACCTCCGCCGTCCATCTCATTTCACCAGCGGCTCAACTCTACCAAACGCGCTTCCGCGCGTCGAGATTCAAACCGCATCAAGTCATTGCATCGGACGAAAGCAGCAACAAACAAAGCAACCACAAAATTTATGCAGCTGATCAATCTCTTTCTCTCTCTATCTGTCTCTTCCATGGAATGGTAGATTTGAGAACTCAACAGGTAGGAGTAGGAGGAGTTCGAGAGATCGAACGTAACTTGCATTGTGATTTGTCTCATCATTTCATTTTTCCTAATCATAGGATAGGATCAATTGAGAGATTAGTTTTACCTTCTTCTGTTACAGGTTCCGATCtcacaatggggaagtcaccaggaaaatggatcaaaactgtattgtttgggaaaaagtcatccaaatcaaatATTTCAAAAGGCAGAGAGAAGCTTGTTAATCAAGAAGAAGGAGTTGTAGTTACCTCCAAGGTGCTAGAAACTGGTTTGGCTTTAGAACCAACCTCCGATACTATTGCCAGACATGAGGAAGACCTAGAGCTGGAAAATGAAGAAGCAGAAAATGTTATACCTGGGAATCAAGAAATAGACACAGTGGGATCAATTAATGAAGATGCTGCACTAGATCCAGAGAAAATAAGGCTGGAGGAAGCTGCTACCAAGGCACAAGCTGCTTTCAGGGGTTATTTGGCTCGGAGAGCATTTAGGGCCCTAAAAGGCATTATAAGGTTGCAAGCACTCATCCGTGGGCACTTGGTTAGGAGACAAGCTGTTGCAACATTATGCTCTATGTATGGTATTGTCAAGTTTCAAGCACTTGTTCGTGGAGGAATAGTTAGACATTCTGACGTTGGATCTGAAATCCAAGAGAAGTGCAACATATTGAACCCTCTGGATGGCAAGCTTGTCAAGCCAATTGCTATATCCATGAAAATTACCAAGCTGTCTGCAAATGCTTTCATTCGTAAGCTTCTCACTTCATCAACCAGAATAATGGTGCTGCAGCTGCAATATGTTCCTGGTGATCCAAATTCTGTCCTAAGTTGGTTGGAGCGCTGGTCAGCATCTCATTTTTGGAAACCAGTTCCCCAGCCTAAGAAAATTCGGGATACTAAGTCTCATAGAAAGCATGGCAATATTTCAGTTGGAGATACTCATATGAGCAAGTCAAAACGAACCAACAGGAAGCTTCCTACTGCAAGTTTTGACTCAGTCCCAGTGCAAGCACATCCTGAATTTGAAAAACCAAAACGGAACATGAGGAAAATTCCAAGCCAATCCTCAGATCCTCCTGTGCAGGAAAATCCACAAAGTGAGCTTGAAAAGATTAAACGTAACCTGAGGAAAGTTCATAACCCAGTTGTTGAGAATGCTGTTCCGTCAGAAGTTGAATCGGAGACGCCAAAGGATCATTTGGAAAAGGCAACAGTTACCTCATGCCTTGCTGTTTCAGAACAAGAGGTCATTAGTTCTAATGAGAAGATCAAGAAGGAAGCAACATTAATTGTTTCTAGTGTGCCAGATATAGAAACTACTCCAAGACTTTCAGTTAGTAAGGAGGTGTTAGACTCACCAAGCAGTTATCAAGTGACTGTGGAATCAAAACCATTGACTGAGATTACAACTAAAGATAAAAACATTCATGTTTCTGATGAAGTAAAAAACGAGCCCATAGATTTACCAGAGCCTATTTGTAAAGATGAAAATTCTCACTTAACAAATGGAGATTTGAGTCACAAGGAAGATCAAATAGGCAGTGAAAACCAGAAACCAAACGGAAAAGCCTCAATTGTAGCAAAGCAGGAACGTGCAGAGAATGGTATACAGAATAGTCCAGCACTACCAAGTTACATGGCAGCAACTGAATCTGCAAAGGCAAAGTTGAAGGCACAAGGATCCCCGAGATTTGGACAAGATGGAAGTGAAAAAAACAACCATACTCGGCGACATTCTCTGCCATCCTCAACTAACTGCAAAATTAGTTCGCATTCACCTAGGACACTGAGACAAGTTCAATCAGGAGGCAAAGGTGGCCACAGAAGTGACAGAACTGTATCATCTTCTAGAGATGGGAATGGAAAGGTAATTCAAGCAGAGTGGAGGCGGTAA 2193 0.4154 MSHTRPHYSCQRGSHTSHHATHLRKTPRASTSAVHLISPAAQLYQTRFRASRFKPHQVIASDESSNKQSNHKIYAADQSLSLSICLFHGMVDLRTQQVGVGGVREIERNLHCDLSHHFIFPNHRIGSIERLVLPSSVTGSDLTMGKSPGKWIKTVLFGKKSSKSNISKGREKLVNQEEGVVVTSKVLETGLALEPTSDTIARHEEDLELENEEAENVIPGNQEIDTVGSINEDAALDPEKIRLEEAATKAQAAFRGYLARRAFRALKGIIRLQALIRGHLVRRQAVATLCSMYGIVKFQALVRGGIVRHSDVGSEIQEKCNILNPLDGKLVKPIAISMKITKLSANAFIRKLLTSSTRIMVLQLQYVPGDPNSVLSWLERWSASHFWKPVPQPKKIRDTKSHRKHGNISVGDTHMSKSKRTNRKLPTASFDSVPVQAHPEFEKPKRNMRKIPSQSSDPPVQENPQSELEKIKRNLRKVHNPVVENAVPSEVESETPKDHLEKATVTSCLAVSEQEVISSNEKIKKEATLIVSSVPDIETTPRLSVSKEVLDSPSSYQVTVESKPLTEITTKDKNIHVSDEVKNEPIDLPEPICKDENSHLTNGDLSHKEDQIGSENQKPNGKASIVAKQERAENGIQNSPALPSYMAATESAKAKLKAQGSPRFGQDGSEKNNHTRRHSLPSSTNCKISSHSPRTLRQVQSGGKGGHRSDRTVSSSRDGNGKVIQAEWRR 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00925 730 Pfam IQ calmodulin-binding motif 267 284 IPR000048 GO:0005515
Gma17g00925 730 Pfam IQ calmodulin-binding motif 245 264 IPR000048 GO:0005515
Gma17g00925 730 SMART iq_5 242 264 IPR000048 GO:0005515
Gma17g00925 730 SMART iq_5 265 286 IPR000048 GO:0005515
Gma17g00925 730 ProSiteProfiles IQ motif profile. 267 294 IPR000048 GO:0005515
Gma17g00925 730 MobiDBLite consensus disorder prediction 1 16 - -
Gma17g00925 730 ProSiteProfiles IQ motif profile. 243 271 IPR000048 GO:0005515
Gma17g00925 730 Pfam Protein of unknown function (DUF4005) 629 709 IPR025064 -
Gma17g00925 730 Gene3D - 241 291 - -
Gma17g00925 730 MobiDBLite consensus disorder prediction 1 31 - -
Gma17g00925 730 MobiDBLite consensus disorder prediction 575 730 - -
Gma17g00925 730 MobiDBLite consensus disorder prediction 600 615 - -
Gma17g00925 730 PANTHER IQ-DOMAIN 5-RELATED 144 718 - -
Gma17g00925 730 PANTHER PROTEIN IQ-DOMAIN 31 144 718 - -
Gma17g00925 730 MobiDBLite consensus disorder prediction 575 594 - -
Gma17g00925 730 MobiDBLite consensus disorder prediction 631 645 - -
Gma17g00925 730 MobiDBLite consensus disorder prediction 678 699 - -
Gma17g00925 730 MobiDBLite consensus disorder prediction 392 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00925 Gma-Chr17 7894922 7902093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00925 144 730 IQD Protein Family AT1G74690 44.480 1.36e-129 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00925 - - gmx:100807118 1134.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00278 05 2504957 2512810 Gma17g00925 17 7894922 7902093 ECH
Gma02g00190 02 1835633 1840918 Gma17g00925 17 7894922 7902093 ECH
Gma01g00396 01 4848928 4853865 Gma17g00925 17 7894922 7902093 ECH
Gma08g02796 08 43947319 43952431 Gma17g00925 17 7894922 7902093 ECH
Gma18g01115 18 16136569 16141916 Gma17g00925 17 7894922 7902093 ECH
Gma17g00925 17 7894922 7902093 Gma17g00925 17 7894922 7902093 ECH
Gma17g00925 17 7894922 7902093 Gma05g00278 05 2504957 2512810 GST
Gma01g00396 01 4848928 4853865 Gma17g00925 17 7894922 7902093 PCT