Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00922 ATGGAGATTGCTTCGGAGAGATCTGGTGATGGATCTAGCGGACTCAAGGAAGAAAATAGTGTTGGTGATGATGATGGTCGTCATAAACAAGAGATTATTGTCGAGGAACCACTCGTGGCTAATACCGAAAGATCCATACTAGAGGCTGGACCTAGCACATCCCCAAACAAAAAGGAAGACGAGGTTGATGATCAGCTTGAGACTGCTAAAGCTGAAATGGGTGTGGTGAGAGAAGAAAATCAACGGCTAAAGATGTGTTTGAACAAAATAATGAATGAATATCGGACACTAGAGATGCAATTTCAAGATATACTAAAGCAACAAGGGACAAAAAAGAACGTTGATAAAGGAAAGGCTGATAGCCATGAAGAAATATTAGAGGAATCGGATCTTGTTTCCCTCTGCCTTGGAAGAGTTCCTACCATTAATGCAAGAAGTGATGAGAAAATCAAAGTTTCTAATAAGCCATTGAAGGATGATGAAGGGTTTAATAACGAAGAGTTGACTCTTGGACTAGAGTGCAAATTTGAAACATCAAAGTCAGGAAGCACGACTGAAGCTTTGCCTAATAATATTCCAAGCCCAGAAAATAGTTGTGAAGTACCAAAGGAAGAAGGTGGGGAGAGTAAGGAGGCACTCAAGACTATGAGAGACAGTACAGAGGATGAAGTTGCTCAGCAAAATCCTACAAAGAAACCTCGAGTTTGTGTTAGAGCAAGATGTGACACTCCAACAATGAATGACGGATGCCAATGGAGGAAATATGGACAAAAGATTTCAAAGGGGAATCCTTGCCCTCGAGCTTACTATCGTTGCACAATTGCACCGTCATGCCCAGTTAGAAAACAGGTGCAAAGATGTGCTGATGACAAGTCGATTTTAATCACCACCTACGAAGGGACCCACAACCACTCTCTTCCACCAACAGCCACTGCCATGGCATCCACAACTTCCGCAGCTGCCTCCATGCTCTTGTCTGGTTCATCAACCTCTAACTCTAACTCCGCCTCAATACCTTCAGCAACCCCCACAAATCTCCACGGCCTCAACTTCTATCTCTCTGAAGGTTCAAAGCCAAGACAACTATACCTATCCAACCCTGCACTATCGTCTTCACCTTCACATCCAACCATAACTCTAGACCTCACTACTTCACACCCTGCAGCATCTTCCTCCTCATCATCACCCTTTTTCAGATTCAATTCAAACTACAACAACAACAACCAACCCAGATACCCTTCTTCCTCATCAAGCCTAAGCTTCAGTAGTAATAATTCCTCCCAAATTGCCAATGCTATATCTTGGAGCAACGGCTTCTTAAACCACAATAATAGGGACATCCTTAGTAGTGTGAACTTTGGAAGACAACAACAAATGGAGAACGTGTACCAATCCTACATGCAAAAGAACAACAGCAACAACAACAACAACAACACAAGCCTTGTTCCTCAAGCTGATACTATCTCTGCAGCAACGAAAGTGATCACAGCGGACCCCACTTTTCAGTCAGCTTTGGCAGCAGCACTTTCTTCGTTTATTGGTGGCGGTGGTGTTGGAAACACGCGAGGAAGTCAAGGTTGTAATTTCGGAGAAAGTTTGAGTTTGGGTCAGAAAATGAAATGGGGTGAGGTGTTTCCAGTGTCGGAGAAAGGTTGTGCATCGAGCTTCGTGAACAAAACGCCGGTAGCGAATACACAGACGGAAAGTTTGATGTTTCTGCCGCCGTCGTCTTTGCCGTTTTCTTCTACCACCAAAAGTGCATCTGCATCTCCTGCTGATAATAGCAACACCACCATCAATTGA 1803 0.4376 MEIASERSGDGSSGLKEENSVGDDDGRHKQEIIVEEPLVANTERSILEAGPSTSPNKKEDEVDDQLETAKAEMGVVREENQRLKMCLNKIMNEYRTLEMQFQDILKQQGTKKNVDKGKADSHEEILEESDLVSLCLGRVPTINARSDEKIKVSNKPLKDDEGFNNEELTLGLECKFETSKSGSTTEALPNNIPSPENSCEVPKEEGGESKEALKTMRDSTEDEVAQQNPTKKPRVCVRARCDTPTMNDGCQWRKYGQKISKGNPCPRAYYRCTIAPSCPVRKQVQRCADDKSILITTYEGTHNHSLPPTATAMASTTSAAASMLLSGSSTSNSNSASIPSATPTNLHGLNFYLSEGSKPRQLYLSNPALSSSPSHPTITLDLTTSHPAASSSSSSPFFRFNSNYNNNNQPRYPSSSSSLSFSSNNSSQIANAISWSNGFLNHNNRDILSSVNFGRQQQMENVYQSYMQKNNSNNNNNNTSLVPQADTISAATKVITADPTFQSALAAALSSFIGGGGVGNTRGSQGCNFGESLSLGQKMKWGEVFPVSEKGCASSFVNKTPVANTQTESLMFLPPSSLPFSSTTKSASASPADNSNTTIN 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00922 600 MobiDBLite consensus disorder prediction 11 34 - -
Gma17g00922 600 MobiDBLite consensus disorder prediction 1 67 - -
Gma17g00922 600 MobiDBLite consensus disorder prediction 181 197 - -
Gma17g00922 600 ProSiteProfiles WRKY domain profile. 241 307 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma17g00922 600 Pfam WRKY DNA -binding domain 247 304 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma17g00922 600 MobiDBLite consensus disorder prediction 181 216 - -
Gma17g00922 600 Gene3D WRKY domain 231 308 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma17g00922 600 SMART WRKY_cls 246 306 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma17g00922 600 MobiDBLite consensus disorder prediction 201 216 - -
Gma17g00922 600 Coils Coil 87 107 - -
Gma17g00922 600 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 48 595 IPR044810 GO:0003700
Gma17g00922 600 SUPERFAMILY WRKY DNA-binding domain 239 307 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma17g00922 600 PANTHER WRKY TRANSCRIPTION FACTOR 61-RELATED 48 595 - -
Gma17g00922 600 MobiDBLite consensus disorder prediction 364 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00922 Gma-Chr17 7867378 7873082 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00922 40 515 WRKY Transcription Factor Family AT1G18860 40.000 2.65e-77 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma17g00922 WRKY 1.4e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00922 - - gmx:100805360 1021.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00281 05 2533087 2538635 Gma17g00922 17 7867378 7873082 ECH
Gma19g00181 19 2218178 2221556 Gma17g00922 17 7867378 7873082 ECH
Gma02g00196 02 1870808 1877287 Gma17g00922 17 7867378 7873082 ECH
Gma01g00390 01 4785070 4790972 Gma17g00922 17 7867378 7873082 ECH
Gma18g01118 18 16214826 16219400 Gma17g00922 17 7867378 7873082 ECH
Gma17g00922 17 7867378 7873082 Gma17g00922 17 7867378 7873082 ECH
Gma17g00922 17 7867378 7873082 Gma05g00281 05 2533087 2538635 GST
Gma01g00390 01 4785070 4790972 Gma17g00922 17 7867378 7873082 PCT