Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00921 ATGTTCAAGCTTTTGGTTAGTAGAGCAGCTAGGGTTTCAACTCCACACAACCACAATGCCTTTGCTTCTTTCGCTTTCTCTAGGTATGCTCATTCATTACCATTTGCAACTGTAGAAGCAGAAGAGATATCAGGCTCTAGGGCTGCTGAAGTTTTGAACCTGGTGCAAGGTAAATGGGTAGGATCTTCAAATTGGAATACAGTTGTAGATCCTTTAAATGGAGACTCATTTATTAAAGTTGCTGAAGTTGATGAAACAGGCATTCAGCCCTTTGTAGAAAGCTTGTCCAGCTGTCCCAAACATGGTGCACACAATCCTTTTAAGGCACCAGAGAGATATCTCATGTTTGGAGAGATATCTGCTAAGGCAGCTCACATGTTATCACTTCCTAAGGTTTTGGATTTCTTTACAAGGTTAATACAAAGAGTTTCTCCAAAGAGTTACCAGCAGGCTTTTGGTGAAGTCTATGTGACACAAAAGTTTCTAGAGAATTTTTGTGGAGACCAGGTTCGTTTCCTGGCAAGGTCTTTTGCTGTACCTGGAAATCATCTTGGACAACAAAGTCATGGTTTTCGTTGGCCATATGGTCCGGTGGCAATTATTACTCCTTTTAATTTTCCCTTAGAGATTCCTGTCCTTCAATTGATGGGTGCACTTTATATGGGCAACAAGCCAGTCCTTAAAGTTGATAGCAAGGTGAGCATTGTTATGGAACAAATGTTGCGCCTGCTTCATACCTGTGGCTTACCTCTAGAAGATGTAGACTTCATAAATTCTGATGGGAAGACAATGAACAAGCTGTTGCTGGAGGGAAATCCACGAATGACTCTTTTTACTGGTAGTTCAAGAGTGGCAGAGAAGTTGGCTGTTGATTTGAAGGGCCGTGTTAAATTGGAAGATGCTGGATTTGACTGGAAAATACTGGGCCCTGATGTGCATCAGGAAGATTACGTAGCATGGGTCTGTGATCAGGATGCATACGCATGCAGTGGTCAGAAATGCTCAGCACAATCATTGTTATTTATGCATGAGAACTGGTCTAAAACTTCCTTGCTATCTAAGTTGAAAGATCTTGCTGAGAGAAGAAAGTTGGCAGACTTGACAATCGGCCCAGTTCTCACAGTTACGACTGATTCAATGCTTGAGCATGTGAATAAGTTGCTTGAGATACCAGGATCAAAGTTGCTATTCGGGGGTAGTCCTCTAGAGAACCATTCAATTCCACCTATTTATGGTGCTATTAAACCAACAGCTGTCTATGTTCCTCTCGAAGAAATTATGAAGGATAAGAATTTTGAGCTTGTAACAAAAGAAATATTTGGACCATTTCAGGTTATCACGGACTATCAAAACAGTCAGCTAGCAGTTGTATTGGATGCTTTGGAAAGAATGCATAACCATTTAACAGCTGCTGTAGTTTCAAATGATCCTTTGTTTTTACAGGAAGTCATTGGCAAATCAGTAAATGGTACTACTTATGCTGGTTTAAGAGCAAGGACGACCGGAGCTCCACAGAATCACTGGTTTGGACCCGCTGGTGATGCTAGAGGTGCAGGAATTGGAACACCAGAGGCTATAAAACTTGTATGGTCTTGCCACAGAGAAATAATCTATGATTTTGGGCCTGTGCCAAAGAATTGGGAAGTTCCTCCTTCTACTTGA 1662 0.4152 MFKLLVSRAARVSTPHNHNAFASFAFSRYAHSLPFATVEAEEISGSRAAEVLNLVQGKWVGSSNWNTVVDPLNGDSFIKVAEVDETGIQPFVESLSSCPKHGAHNPFKAPERYLMFGEISAKAAHMLSLPKVLDFFTRLIQRVSPKSYQQAFGEVYVTQKFLENFCGDQVRFLARSFAVPGNHLGQQSHGFRWPYGPVAIITPFNFPLEIPVLQLMGALYMGNKPVLKVDSKVSIVMEQMLRLLHTCGLPLEDVDFINSDGKTMNKLLLEGNPRMTLFTGSSRVAEKLAVDLKGRVKLEDAGFDWKILGPDVHQEDYVAWVCDQDAYACSGQKCSAQSLLFMHENWSKTSLLSKLKDLAERRKLADLTIGPVLTVTTDSMLEHVNKLLEIPGSKLLFGGSPLENHSIPPIYGAIKPTAVYVPLEEIMKDKNFELVTKEIFGPFQVITDYQNSQLAVVLDALERMHNHLTAAVVSNDPLFLQEVIGKSVNGTTYAGLRARTTGAPQNHWFGPAGDARGAGIGTPEAIKLVWSCHREIIYDFGPVPKNWEVPPST 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00921 553 SUPERFAMILY ALDH-like 53 500 IPR016161 GO:0016491
Gma17g00921 553 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 304 494 IPR016163 GO:0016620
Gma17g00921 553 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 44 303 IPR016162 GO:0016491
Gma17g00921 553 PANTHER DELTA-1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE 12A1, MITOCHONDRIAL 24 552 - -
Gma17g00921 553 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 327 338 IPR016160 GO:0016491
Gma17g00921 553 Pfam Aldehyde dehydrogenase family 66 495 IPR015590 GO:0016491
Gma17g00921 553 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 24 552 IPR044638 GO:0004029
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00921 Gma-Chr17 7852052 7860328 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00921 1 553 Aldehyde Dehydrogenase Gene Family AT5G62530 78.957 0.0 947
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00921 K00294 - gmx:100806579 1110.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00921 17 7852052 7860328 Gma17g00921 17 7852052 7860328 ECH
Gma17g00921 17 7852052 7860328 Gma05g00282 05 2547242 2553943 GST