Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00920 ATGTTCAAGTCTTTGGTTAGCAGAGCTACTAAGGATTCAATTTCACGCAACCACAATGCCATTGCTTCTTTTGCTTTCTCTAGCAGGTGTGCTCATTCATTATCATTTGCCACAGTAGAAGCAGAAGAGGTATCAGGTTCTAGGCCAGCTGAAGTTTTGCACTTGGTGCAAGGTAAATGGGTAGGATCTTCAAATTGGAACACAATTGCAGATCCTTTAAATGGAGACTCGTTTATTAAAGTTGCTGAAGTTGATGAAACGGGCATTCAGCCTTTTATAAAGAGCTTGTCCAGCTGTCCCAAACATGGTGTACACAATCCTTTTAAGGCACCAGAGAGATATCTTATGTATGGAGATATATCTACTAAGGCAGCTCACATGCTATCACTTCCTAAGGTTTCAGATTTCTTTACAAAGTTAATACAAAGAGTTTCTCCTAAGAGTTACCAGCAGGCTTTTGGGGAAGTGTCTTTTGGTGTCCCTGGAAATCATCTTAGACAACAAAGTCATGGTTTTCGTTGGCCATATGGTCCCGTGGCAATTATTACTCCTTTTAATTTTCCCTTGGAGATTGCTGTCCTTCAATTGATGGGTGCACTTTACATGGGCAACAAGCCAGTCCTTAAAGTTGATAGCAAGGTGAGCCATTATGGAACAAATACAATGAACAAGCTGTTGCTGGAGGCACATCCACGAATGACCCTTTTTACTGGTAGTTCAAGAGTGGCAGAGAAGTTGACTGTTGATTTGAAAGGTCGCGTTAAATTGGAAGATGCTGGATTTGACTGGAAAATACTGGGCCCTGACGTCCATCAGGATCTGGAAGATTACATTGCTTGGGTCTGTGATCAGGATGCATATGCATGCAGTGGTCAGAAATGCTCGGCACAATCATTATTATTTATGCATAAGAACTGGTCTAAAACATCCTTGCTATCTAAGTTGAAAGATCTTGCTGAGAGAAGAAAGCTAGAAGACTTGACAATCGGCCCAGTCCTCACATGTACAACTGATTTGATGCTTGAACACAAGAATAAATTGCTTGAGATACCAGGATCAAAGCTTCTCTTTGGGGGTAGTCCTCTAGACAACCATTCAATTCCATCTATTTAG 1113 0.4124 MFKSLVSRATKDSISRNHNAIASFAFSSRCAHSLSFATVEAEEVSGSRPAEVLHLVQGKWVGSSNWNTIADPLNGDSFIKVAEVDETGIQPFIKSLSSCPKHGVHNPFKAPERYLMYGDISTKAAHMLSLPKVSDFFTKLIQRVSPKSYQQAFGEVSFGVPGNHLRQQSHGFRWPYGPVAIITPFNFPLEIAVLQLMGALYMGNKPVLKVDSKVSHYGTNTMNKLLLEAHPRMTLFTGSSRVAEKLTVDLKGRVKLEDAGFDWKILGPDVHQDLEDYIAWVCDQDAYACSGQKCSAQSLLFMHKNWSKTSLLSKLKDLAERRKLEDLTIGPVLTCTTDLMLEHKNKLLEIPGSKLLFGGSPLDNHSIPSI 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00920 370 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 22 215 IPR044638 GO:0004029
Gma17g00920 370 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 220 370 IPR044638 GO:0004029
Gma17g00920 370 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 218 259 IPR016162 GO:0016491
Gma17g00920 370 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 260 333 IPR016163 GO:0016620
Gma17g00920 370 PANTHER DELTA-1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE 12A1, MITOCHONDRIAL 22 215 - -
Gma17g00920 370 PANTHER DELTA-1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE 12A1, MITOCHONDRIAL 220 370 - -
Gma17g00920 370 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 51 217 IPR016162 GO:0016491
Gma17g00920 370 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 287 298 IPR016160 GO:0016491
Gma17g00920 370 SUPERFAMILY ALDH-like 54 363 IPR016161 GO:0016491
Gma17g00920 370 Pfam Aldehyde dehydrogenase family 165 218 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00920 Gma-Chr17 7843846 7850614 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00920 1 370 Aldehyde Dehydrogenase Gene Family AT5G62530 66.747 0.0 556
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00920 K00294 - gmx:100813821 650.973